RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ZNF518BQ9C0D4 1074 aa23.82■■□□□ 1.4
TRAPPC4-208ENST00000527680 KCNA4P22459 653 aa23.81■■□□□ 1.4
TRAPPC4-208ENST00000527680 YWHAQP27348 245 aa23.81■■□□□ 1.4
TRAPPC4-208ENST00000527680 CDH8P55286 799 aa23.81■■□□□ 1.4
TRAPPC4-208ENST00000527680 ZXDBP98169 803 aa23.81■■□□□ 1.4
TRAPPC4-208ENST00000527680 ZNF667Q5HYK9 610 aa23.81■■□□□ 1.4
TRAPPC4-208ENST00000527680 FILIP1Q7Z7B0 1213 aa23.81■■□□□ 1.4
TRAPPC4-208ENST00000527680 NUP93Q8N1F7 819 aa23.81■■□□□ 1.4
TRAPPC4-208ENST00000527680 EXOC1Q9NV70 894 aa23.81■■□□□ 1.4
TRAPPC4-208ENST00000527680 CPQQ9Y646 472 aa23.81■■□□□ 1.4
TRAPPC4-208ENST00000527680 PTPRDP23468 1912 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 SLC9A3R1O14745 358 aaPredicted RBP23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 APBB3O95704 486 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 STAU1O95793 577 aaKnown RBP23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 MBL2P11226 248 aaPredicted RBP23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 DGKEP52429 567 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 AP3M2P53677 418 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 CACNA2D1P54289 1103 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 SEC13P55735 322 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 SLC7A9P82251 487 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 DNM1Q05193 864 aaKnown RBP23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 SF3A2Q15428 464 aaKnown RBP23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 ZNF699Q32M78 642 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 C2orf27AQ580R0 203 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 IL31Q6EBC2 164 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 EZH1Q92800 747 aaPredicted RBP23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 XYLT2Q9H1B5 865 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 ATP8B3O60423 1300 aa23.8■■□□□ 1.4
TRAPPC4-208ENST00000527680 NCOR2Q9Y618 2525 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 SCAMP3O14828 347 aaKnown RBP23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 AKAP3O75969 853 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 RTN3O95197 1032 aaPredicted RBP23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 SLFN14P0C7P3 912 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 RAP1GAPP47736 663 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 NCOA4Q13772 614 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 ADGRG2Q8IZP9 1017 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 PARD3BQ8TEW8 1205 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 FBXO32Q969P5 355 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 PAGE5Q96GU1 130 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 GZF1Q9H116 711 aaPredicted RBP23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 SMYD3Q9H7B4 428 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 CFAP97Q9P2B7 532 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 CHORDC1Q9UHD1 332 aaPredicted RBP23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 RCOR1Q9UKL0 485 aa23.79■■□□□ 1.4
TRAPPC4-208ENST00000527680 HELZP42694 1942 aaKnown RBP23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 EPN2O95208 641 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 ZNF806P0C7X5 589 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 STK4Q13043 487 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 ELF2Q15723 593 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 PPM1JQ5JR12 505 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 SCARA5Q6ZMJ2 495 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 TSTD1Q8NFU3 115 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 PLEKHO2Q8TD55 490 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 ELMO3Q96BJ8 720 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 ZC3H10Q96K80 434 aaKnown RBP23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 TNIP3Q96KP6 325 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 KCNK16Q96T55 309 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 TMEM30AQ9NV96 361 aa23.78■■□□□ 1.4
TRAPPC4-208ENST00000527680 LRRIQ3A6PVS8 624 aaPredicted RBP23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 DCLK1O15075 740 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 RHOBTB1O94844 696 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 OAS1P00973 400 aaKnown RBP23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 C4BPAP04003 597 aaKnown RBP23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 P4HA1P13674 534 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 GBP1P32455 592 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 OPRD1P41143 372 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 PKP1Q13835 747 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 DHCR24Q15392 516 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 KMT5BQ4FZB7 885 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 TTC30AQ86WT1 665 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 DDX42Q86XP3 938 aaKnown RBP eCLIP23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 CCDC33Q8N5R6 958 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 PDZD8Q8NEN9 1154 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 EBF1Q9UH73 591 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 INVSQ9Y283 1065 aa23.77■■□□□ 1.4
TRAPPC4-208ENST00000527680 K7EQS6 105 aa23.76■■□□□ 1.39
TRAPPC4-208ENST00000527680 KLRC4O43908 158 aa23.76■■□□□ 1.39
TRAPPC4-208ENST00000527680 CYP17A1P05093 508 aa23.76■■□□□ 1.39
TRAPPC4-208ENST00000527680 PLK5Q496M5 336 aa23.76■■□□□ 1.39
TRAPPC4-208ENST00000527680 USP33Q8TEY7 942 aa23.76■■□□□ 1.39
TRAPPC4-208ENST00000527680 DDX1Q92499 740 aaKnown RBP23.76■■□□□ 1.39
TRAPPC4-208ENST00000527680 VRTNQ9H8Y1 702 aa23.76■■□□□ 1.39
TRAPPC4-208ENST00000527680 TBC1D14Q9P2M4 693 aa23.76■■□□□ 1.39
TRAPPC4-208ENST00000527680 PCDHGA5Q9Y5G8 931 aa23.76■■□□□ 1.39
TRAPPC4-208ENST00000527680 EML5Q05BV3 1969 aa23.76■■□□□ 1.39
TRAPPC4-208ENST00000527680 MYOFQ9NZM1 2061 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 A0A1B0GVL5 298 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 OLFM2O95897 454 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 SLC6A11P48066 632 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 SGSM1Q2NKQ1 1148 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 USP39Q53GS9 565 aaKnown RBP23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 HECTD3Q5T447 861 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 CEP135Q66GS9 1140 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 ACOT1Q86TX2 421 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 KIAA1958Q8N8K9 716 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 KIAA0895Q8NCT3 520 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 SCAMP5Q8TAC9 235 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 PNKPQ96T60 521 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 NACA2Q9H009 215 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 DUSP15Q9H1R2 295 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms