RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 SEC13P55735 322 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 SNRPFP62306 86 aaKnown RBP17.15■□□□□ 0.34
CHEK1-209ENST00000527013 TAF10Q12962 218 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 PSMD6Q15008 389 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 SNRNP35Q16560 246 aaKnown RBP17.15■□□□□ 0.34
CHEK1-209ENST00000527013 MDH1BQ5I0G3 518 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 ANO7Q6IWH7 933 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 RHBDF2Q6PJF5 856 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 TMEM92Q6UXU6 159 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 DDX42Q86XP3 938 aaKnown RBP eCLIP17.15■□□□□ 0.34
CHEK1-209ENST00000527013 PDILTQ8N807 584 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 HPS3Q969F9 1004 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 PNKPQ96T60 521 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 DUSP9Q99956 384 aaKnown RBP17.15■□□□□ 0.34
CHEK1-209ENST00000527013 MRPL45Q9BRJ2 306 aaKnown RBP17.15■□□□□ 0.34
CHEK1-209ENST00000527013 ELOVL4Q9GZR5 314 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 SNX25Q9H3E2 840 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 ZSCAN16Q9H4T2 348 aaPredicted RBP17.15■□□□□ 0.34
CHEK1-209ENST00000527013 TMEM30AQ9NV96 361 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 INVSQ9Y283 1065 aa17.15■□□□□ 0.34
CHEK1-209ENST00000527013 TGFB1I1O43294 461 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 CSRP1P21291 193 aaKnown RBP17.14■□□□□ 0.33
CHEK1-209ENST00000527013 BCKDHBP21953 392 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 P2RY2P41231 377 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 KIR2DL1P43626 348 aaPredicted RBP17.14■□□□□ 0.33
CHEK1-209ENST00000527013 NOVA1P51513 510 aaKnown RBP17.14■□□□□ 0.33
CHEK1-209ENST00000527013 CACNA2D1P54289 1103 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 TDRD10Q5VZ19 366 aaKnown RBP17.14■□□□□ 0.33
CHEK1-209ENST00000527013 HS2ST1Q7LGA3 356 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 CYP2U1Q7Z449 544 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 CCDC33Q8N5R6 958 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 IL17RCQ8NAC3 791 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 LINC00301Q8NCQ3 95 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 OR6B3Q8NGW1 331 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 OVCA2Q8WZ82 227 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 OTUB2Q96DC9 234 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 INTS4Q96HW7 963 aaKnown RBP17.14■□□□□ 0.33
CHEK1-209ENST00000527013 SLITRK1Q96PX8 696 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 CGRRF1Q99675 332 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 AGPAT3Q9NRZ7 376 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 TBC1D14Q9P2M4 693 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 EVLQ9UI08 416 aaPredicted RBP17.14■□□□□ 0.33
CHEK1-209ENST00000527013 WASF3Q9UPY6 502 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 MTMR6Q9Y217 621 aa17.14■□□□□ 0.33
CHEK1-209ENST00000527013 FRYQ5TBA9 3013 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 E2F8A0AVK6 867 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 ALDH1A2O94788 518 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 KAT7O95251 611 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 PROS1P07225 676 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 CEACAM1P13688 526 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 HNRNPLP14866 589 aaKnown RBP eCLIP17.13■□□□□ 0.33
CHEK1-209ENST00000527013 TNNI1P19237 187 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 SLC6A11P48066 632 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 AMPD3Q01432 767 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 CYP24A1Q07973 514 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 EHHADHQ08426 723 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 MESP2Q0VG99 397 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 WDR72Q3MJ13 1102 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 SPDYCQ5MJ68 293 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 SNX30Q5VWJ9 437 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 PHTF2Q8N3S3 785 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 PDZD8Q8NEN9 1154 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 FNBP1Q96RU3 617 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 GZF1Q9H116 711 aaPredicted RBP17.13■□□□□ 0.33
CHEK1-209ENST00000527013 XYLT2Q9H1B5 865 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 TMEM9BQ9NQ34 198 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 SMPD4Q9NXE4 827 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 CFAP97Q9P2B7 532 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 UBE4BO95155 1302 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 PLXND1Q9Y4D7 1925 aa17.13■□□□□ 0.33
CHEK1-209ENST00000527013 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.12■□□□□ 0.33
CHEK1-209ENST00000527013 SGK1O00141 431 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 TNFRSF10BO14763 440 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 GIPC1O14908 333 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 PPP6R2O75170 966 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 ADH1CP00326 375 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 APODP05090 189 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 DLATP10515 647 aaKnown RBP17.12■□□□□ 0.33
CHEK1-209ENST00000527013 ATICP31939 592 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 GRIA2P42262 883 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 TNFRSF4P43489 277 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 TNNC1P63316 161 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 IRX4P78413 519 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 EOGTQ5NDL2 527 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 FAM26FQ5R3K3 315 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 SH3PXD2AQ5TCZ1 1133 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 C12orf40Q86WS4 652 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 SFTPA1Q8IWL2 248 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 C12orf56Q8IXR9 622 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 NUP93Q8N1F7 819 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 ALLCQ8N6M5 410 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 XXYLT1Q8NBI6 393 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 RDH13Q8NBN7 331 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 TXNDC5Q8NBS9 432 aaKnown RBP17.12■□□□□ 0.33
CHEK1-209ENST00000527013 B3GALNT2Q8NCR0 500 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 WHAMMQ8TF30 809 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 ZNF516Q92618 1163 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 ZFRQ96KR1 1074 aaKnown RBP17.12■□□□□ 0.33
CHEK1-209ENST00000527013 B3GNT5Q9BYG0 378 aa17.12■□□□□ 0.33
CHEK1-209ENST00000527013 ZNF518BQ9C0D4 1074 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms