RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ZNF512Q96ME7 567 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-205ENST00000526954 NOX5Q96PH1 765 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 CHP1Q99653 195 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 TTLL2Q9BWV7 592 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 EHD2Q9NZN4 543 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 USP3Q9Y6I4 520 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 DOCK6Q96HP0 2047 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 NOTCH4Q99466 2003 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-205ENST00000526954 FAM92AA1XBS5 289 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 SPDYE4A6NLX3 237 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 CCL16O15467 120 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 GABBR2O75899 941 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 RTN3O95197 1032 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-205ENST00000526954 ACADSBP45954 432 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 SLC5A3P53794 718 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 CENPCQ03188 943 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 DLX2Q07687 328 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-205ENST00000526954 PDCLQ13371 301 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 PPP1R2P3Q6NXS1 205 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 GPRIN1Q7Z2K8 1008 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 TMEM110Q86TL2 294 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 SCML4Q8N228 414 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 C12orf76Q8N812 135 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-205ENST00000526954 TRMT2BQ96GJ1 504 aaKnown RBP17.42■□□□□ 0.38
CAPN1-205ENST00000526954 MSLNLQ96KJ4 702 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 FBXO44Q9H4M3 255 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 NHEJ1Q9H9Q4 299 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-205ENST00000526954 SEPT11Q9NVA2 429 aaKnown RBP17.42■□□□□ 0.38
CAPN1-205ENST00000526954 ADAMTS1Q9UHI8 967 aa17.42■□□□□ 0.38
CAPN1-205ENST00000526954 DENND4CQ5VZ89 1909 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 PTPN2P17706 415 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 GABRB2P47870 512 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 EPHA5P54756 1037 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 SNX16P57768 344 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 ITIH3Q06033 890 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 MTMR3Q13615 1198 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 CCDC85BQ15834 202 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-205ENST00000526954 NAA35Q5VZE5 725 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 TMC5Q6UXY8 1006 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 GPR149Q86SP6 731 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 PHF13Q86YI8 300 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-205ENST00000526954 TMTC1Q8IUR5 882 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 TMEM139Q8IV31 216 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 CPA5Q8WXQ8 436 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 PPP1R13BQ96KQ4 1090 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 CCDC42Q96M95 316 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 CPXM1Q96SM3 734 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 LRRC3Q9BY71 257 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 S1PR5Q9H228 398 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 UXTQ9UBK9 157 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-205ENST00000526954 MYO16Q9Y6X6 1858 aa17.41■□□□□ 0.38
CAPN1-205ENST00000526954 OBSL1O75147 1896 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 A0A087X0T9 212 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 FAM228BP0C875 321 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 MMP8P22894 467 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 RGS7P49802 495 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 TKTL1P51854 596 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 USP46P62068 366 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 TAF12Q16514 161 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 PTPN20Q4JDL3 420 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 RARS2Q5T160 578 aaKnown RBP17.4■□□□□ 0.38
CAPN1-205ENST00000526954 PM20D1Q6GTS8 502 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 ACAD10Q6JQN1 1059 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 ERICH1Q86X53 443 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 CCDC170Q8IYT3 715 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 LEMD2Q8NC56 503 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 MSANTD4Q8NCY6 345 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 STKLD1Q8NE28 680 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 SCAMP5Q8TAC9 235 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 SMG7Q92540 1137 aaKnown RBP17.4■□□□□ 0.38
CAPN1-205ENST00000526954 BAG1Q99933 345 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-205ENST00000526954 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.4■□□□□ 0.38
CAPN1-205ENST00000526954 ADAM7Q9H2U9 754 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 LRRC4Q9HBW1 653 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 AVENQ9NQS1 362 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-205ENST00000526954 CNGB3Q9NQW8 809 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 ST7Q9NRC1 585 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 DNMT3BQ9UBC3 853 aaKnown RBP17.4■□□□□ 0.38
CAPN1-205ENST00000526954 NENFQ9UMX5 172 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 SCML2Q9UQR0 700 aa17.4■□□□□ 0.38
CAPN1-205ENST00000526954 BRWD1Q9NSI6 2320 aa17.39■□□□□ 0.38
CAPN1-205ENST00000526954 RTN2O75298 545 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 FBXO21O94952 628 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 YWHAQP27348 245 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 NSFP46459 744 aaKnown RBP17.39■□□□□ 0.37
CAPN1-205ENST00000526954 ADIGQ0VDE8 80 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 CCDC173Q0VFZ6 552 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 SLC18A3Q16572 532 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 TMC8Q8IU68 726 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 IPO4Q8TEX9 1081 aaKnown RBP17.39■□□□□ 0.37
CAPN1-205ENST00000526954 OVCA2Q8WZ82 227 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 VCPIP1Q96JH7 1222 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 PPP1R9BQ96SB3 815 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 MIS12Q9H081 205 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 ISCUQ9H1K1 167 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 DEF6Q9H4E7 631 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 IL21Q9HBE4 155 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 TAS2R14Q9NYV8 317 aa17.39■□□□□ 0.37
CAPN1-205ENST00000526954 NAGPAQ9UK23 515 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms