RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 BDNFP23560 247 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 NDUFV1P49821 464 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 ZNF143P52747 638 aaPredicted RBP20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 TSPY1Q01534 308 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 ATP13A4Q4VNC1 1196 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 SLC26A9Q7LBE3 791 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 TAS1R1Q7RTX1 841 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 GPRIN1Q7Z2K8 1008 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 MMGT1Q8N4V1 131 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 NDRG1Q92597 394 aaKnown RBP20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 SF3B1O75533 1304 aaKnown RBP eCLIP20.86■□□□□ 0.933e-10■■■■■ 89.1
PPP1CA-204ENST00000526510 PDGFRAP16234 1089 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 SCNN1AP37088 669 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 SSR1P43307 286 aaKnown RBP20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 RAB6CQ53S08 254 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 RAB41Q5JT25 222 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 SH3PXD2AQ5TCZ1 1133 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 CEP57Q86XR8 500 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 AP1M1Q9BXS5 423 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 RAB6CQ9H0N0 254 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 ANKZF1Q9H8Y5 726 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 NR2E1Q9Y466 385 aa20.86■□□□□ 0.93
PPP1CA-204ENST00000526510 GREB1Q4ZG55 1949 aa20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 ZNF638Q14966 1978 aaKnown RBP20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 SLC25A11Q02978 314 aaKnown RBP20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 MAPRE1Q15691 268 aaKnown RBP20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 C15orf59Q2T9L4 293 aaPredicted RBP20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 CCDC14Q49A88 953 aa20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 SLC39A12Q504Y0 691 aa20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 RTP2Q5QGT7 225 aa20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 OTOP2Q7RTS6 562 aa20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 KATNAL2Q8IYT4 538 aa20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 VN1R3Q9BXE9 311 aa20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 UBXN6Q9BZV1 441 aa20.85■□□□□ 0.93
PPP1CA-204ENST00000526510 COL4A4P53420 1690 aaPredicted RBP20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 DPYSL4O14531 572 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 EFCAB14O75071 495 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 RHOXF2BP0C7M4 288 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 IL1R2P27930 398 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 GJC1P36383 396 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 TKTL1P51854 596 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 LONRF2Q1L5Z9 754 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 LRRC38Q5VT99 294 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 ZDHHC14Q8IZN3 488 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 CFAP57Q96MR6 1250 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 RHOXF2Q9BQY4 288 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 CNPY3Q9BT09 278 aa20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.84■□□□□ 0.93
PPP1CA-204ENST00000526510 TCRBV7S2A1N4TA0A589 114 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 TBC1D4O60343 1298 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 BAIAP3O94812 1187 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 TUBB4BP68371 445 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 MRPS5P82675 430 aaKnown RBP20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 ACAP1Q15027 740 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 CTXN3Q4LDR2 81 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 SEL1L2Q5TEA6 688 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 RSPO2Q6UXX9 243 aaPredicted RBP20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 ANKS1BQ7Z6G8 1248 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 ADAT2Q7Z6V5 191 aaKnown RBP20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 GPR161Q8N6U8 529 aaKnown RBP20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 BADQ92934 168 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 HERPUD2Q9BSE4 406 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 ADAM33Q9BZ11 813 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 LRRC4Q9HBW1 653 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 KLHL11Q9NVR0 708 aa20.83■□□□□ 0.93
PPP1CA-204ENST00000526510 TFE3P19532 575 aaPredicted RBP20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 CYP2F1P24903 491 aa20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 ALDH7A1P49419 539 aaKnown RBP20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 ELAVL2Q12926 359 aaKnown RBP20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 ARCQ7LC44 396 aa20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 SPATA2LQ8IUW3 424 aaPredicted RBP20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 RNF168Q8IYW5 571 aaPredicted RBP20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 ANKRD7Q92527 254 aa20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 ACSF2Q96CM8 615 aaPredicted RBP20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 IGSF21Q96ID5 467 aa20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 ULBP1Q9BZM6 244 aa20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 DMAP1Q9NPF5 467 aaPredicted RBP20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 ASNSD1Q9NWL6 643 aa20.83■□□□□ 0.92
PPP1CA-204ENST00000526510 PLXNA3P51805 1871 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 KRIT1O00522 736 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 MIPP30301 263 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 EPHB4P54760 987 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 MRPS25P82663 173 aaKnown RBP20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 LLGL1Q15334 1064 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 EFHC1Q5JVL4 640 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 ZNF280DQ6N043 979 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 KCNT2Q6UVM3 1135 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 C4orf50Q6ZRC1 276 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 CYP4V2Q6ZWL3 525 aaPredicted RBP20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 SLC13A5Q86YT5 568 aaPredicted RBP20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 DCP1BQ8IZD4 617 aaKnown RBP20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 SIX6OS1Q8N1H7 587 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 EXD1Q8NHP7 514 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 PEBP4Q96S96 227 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 PNKPQ96T60 521 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 LRRC1Q9BTT6 524 aa20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 C11orf84Q9BUA3 381 aaPredicted RBP20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 MRPL42Q9Y6G3 142 aaKnown RBP20.82■□□□□ 0.92
PPP1CA-204ENST00000526510 DAOAP59103 153 aa20.81■□□□□ 0.92
PPP1CA-204ENST00000526510 ATP11AP98196 1134 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms