RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 IFRD2Q12894 506 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-204ENST00000526468 RESTQ13127 1097 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 MAPRE1Q15691 268 aaKnown RBP12.52□□□□□ -0.41
CAPN1-204ENST00000526468 C2orf27AQ580R0 203 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 MDH1BQ5I0G3 518 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 PMS2CLQ68D20 193 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 CAVIN1Q6NZI2 390 aaKnown RBP12.52□□□□□ -0.41
CAPN1-204ENST00000526468 VSTM1Q6UX27 236 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 DENND5BQ6ZUT9 1274 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 CYP2U1Q7Z449 544 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 CBWD2Q8IUF1 395 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 CCDC65Q8IXS2 484 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 PDILTQ8N807 584 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 CCDC26Q8TAB7 109 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 MMS19Q96T76 1030 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 CRTAC1Q9NQ79 661 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 INTS13Q9NVM9 706 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 SMPD4Q9NXE4 827 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 TRPM5Q9NZQ8 1165 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 USP25Q9UHP3 1055 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 INVSQ9Y283 1065 aa12.52□□□□□ -0.41
CAPN1-204ENST00000526468 LNP1A1A4G5 178 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 BCLAF3A2AJT9 711 aaKnown RBP12.51□□□□□ -0.41
CAPN1-204ENST00000526468 LEFTY2O00292 366 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 KIAA0391O15091 583 aaKnown RBP12.51□□□□□ -0.41
CAPN1-204ENST00000526468 CAVIN2O95810 425 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 ABL1P00519 1130 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 PDGFRBP09619 1106 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 TCF3P15923 654 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 OPRD1P41143 372 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 USP46P62068 366 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 KDSRQ06136 332 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 ZNF252P-AS1Q0IIN9 211 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 FAM171BQ6P995 826 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 HS2ST1Q7LGA3 356 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 FILIP1Q7Z7B0 1213 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 C11orf74Q86VG3 221 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 WDR49Q8IV35 697 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 CCDC33Q8N5R6 958 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 SPRYD3Q8NCJ5 442 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 GLIS3Q8NEA6 775 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 USP33Q8TEY7 942 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 HPS3Q969F9 1004 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 PCED1BQ96HM7 432 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 SPATA17Q96L03 361 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 CNOT6LQ96LI5 555 aaKnown RBP12.51□□□□□ -0.41
CAPN1-204ENST00000526468 SNX25Q9H3E2 840 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 EHD2Q9NZN4 543 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 EBF1Q9UH73 591 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 CPQQ9Y646 472 aa12.51□□□□□ -0.41
CAPN1-204ENST00000526468 ZFHX4Q86UP3 3567 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 ACACAQ13085 2346 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 ATRXP46100 2492 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 ANKRD11Q6UB99 2663 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-204ENST00000526468 ZNF233A6NK53 670 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 C4orf47A7E2U8 309 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 F8VP50 259 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 DLATP10515 647 aaKnown RBP12.5□□□□□ -0.41
CAPN1-204ENST00000526468 PFKLP17858 780 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 BCKDHBP21953 392 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 WARSP23381 471 aaKnown RBP12.5□□□□□ -0.41
CAPN1-204ENST00000526468 LMO2P25791 158 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 DHPSP49366 369 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-204ENST00000526468 TNNC1P63316 161 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 ASIC1P78348 528 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 SHC2P98077 582 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 SURF1Q15526 300 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 DUOXA2Q1HG44 320 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 USP39Q53GS9 565 aaKnown RBP12.5□□□□□ -0.41
CAPN1-204ENST00000526468 DPH6Q7L8W6 267 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 MDGA1Q8NFP4 955 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 SPACA7Q96KW9 195 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 USP28Q96RU2 1077 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 LSM14BQ9BX40 385 aaKnown RBP12.5□□□□□ -0.41
CAPN1-204ENST00000526468 LINC00597Q9H2U6 94 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 FAM13BQ9NYF5 915 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 BCCIPQ9P287 314 aaKnown RBP eCLIP12.5□□□□□ -0.41
CAPN1-204ENST00000526468 CFAP97Q9P2B7 532 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 MMP17Q9ULZ9 603 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 PTPRBP23467 1997 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 AKAP13Q12802 2813 aa12.5□□□□□ -0.41
CAPN1-204ENST00000526468 BAHCC1Q9P281 2608 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 UBE4BO95155 1302 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 TM4SF5O14894 197 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 ADH1CP00326 375 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 MBL2P11226 248 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-204ENST00000526468 TNNI1P19237 187 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 CYP2J2P51589 502 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 FOXC1Q12948 553 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 STK38Q15208 465 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 SNRNP35Q16560 246 aaKnown RBP12.49□□□□□ -0.41
CAPN1-204ENST00000526468 DAB2IPQ5VWQ8 1189 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 ARMCX6Q7L4S7 300 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 RASSF3Q86WH2 238 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 ALLCQ8N6M5 410 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 OR6B3Q8NGW1 331 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 MYCBPAPQ8TBZ2 947 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 CEP295NLQ96MC4 621 aa12.49□□□□□ -0.41
CAPN1-204ENST00000526468 SLITRK1Q96PX8 696 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms