RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CMTM8Q8IZV2 173 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 STKLD1Q8NE28 680 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 DEPDC1BQ8WUY9 529 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 NAA15Q9BXJ9 866 aaKnown RBP18.25■□□□□ 0.51
LMX1B-203ENST00000526117 VPS16Q9H269 839 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 SLITRK6Q9H5Y7 841 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 KIF9Q9HAQ2 790 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 ZFP14Q9HCL3 533 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 SLC2A4RGQ9NR83 387 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 TRPM5Q9NZQ8 1165 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 TSPAN16Q9UKR8 245 aa18.25■□□□□ 0.51
LMX1B-203ENST00000526117 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.25■□□□□ 0.51
LMX1B-203ENST00000526117 ZNF840PA6NDX5 716 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 BECN2A8MW95 431 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 PES1O00541 588 aaKnown RBP18.24■□□□□ 0.51
LMX1B-203ENST00000526117 XPO1O14980 1071 aaKnown RBP18.24■□□□□ 0.51
LMX1B-203ENST00000526117 TCF3P15923 654 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 CYP4F8P98187 520 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 BST2Q10589 180 aaKnown RBP18.24■□□□□ 0.51
LMX1B-203ENST00000526117 RAB41Q5JT25 222 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 STXBP5Q5T5C0 1151 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 TTC30AQ86WT1 665 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 KIAA1958Q8N8K9 716 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 TFAP2BQ92481 460 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 ERGIC2Q96RQ1 377 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 SLC46A2Q9BY10 475 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 HESX1Q9UBX0 185 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 SCML2Q9UQR0 700 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 SIK3Q9Y2K2 1263 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 USP3Q9Y6I4 520 aa18.24■□□□□ 0.51
LMX1B-203ENST00000526117 ZNF638Q14966 1978 aaKnown RBP18.24■□□□□ 0.51
LMX1B-203ENST00000526117 OLFM2O95897 454 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 UCHL3P15374 230 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 CD19P15391 556 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 PLA2G4AP47712 749 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 KIF11P52732 1056 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 SIGLEC14Q08ET2 396 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 FCHO2Q0JRZ9 810 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 TAF10Q12962 218 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 TANGO2Q6ICL3 276 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 GJB7Q6PEY0 223 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 ARID3BQ8IVW6 561 aaPredicted RBP18.23■□□□□ 0.51
LMX1B-203ENST00000526117 MFSD6LQ8IWD5 586 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 SCML4Q8N228 414 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 ZNF276Q8N554 614 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 SCAMP5Q8TAC9 235 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 RSAD2Q8WXG1 361 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 KCTD13Q8WZ19 329 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 FBXO32Q969P5 355 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 ZSWIM1Q9BR11 485 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 CBX8Q9HC52 389 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 TRPV5Q9NQA5 729 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 DNAJC12Q9UKB3 198 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 ANAPC1Q9H1A4 1944 aa18.23■□□□□ 0.51
LMX1B-203ENST00000526117 KIF26AQ9ULI4 1882 aaPredicted RBP18.22■□□□□ 0.51
LMX1B-203ENST00000526117 OAS1P00973 400 aaKnown RBP18.22■□□□□ 0.51
LMX1B-203ENST00000526117 ATP1A3P13637 1013 aa18.22■□□□□ 0.51
LMX1B-203ENST00000526117 KRT5P13647 590 aa18.22■□□□□ 0.51
LMX1B-203ENST00000526117 AVPR1AP37288 418 aa18.22■□□□□ 0.51
LMX1B-203ENST00000526117 APBA1Q02410 837 aa18.22■□□□□ 0.51
LMX1B-203ENST00000526117 GOLGA7BQ2TAP0 167 aa18.22■□□□□ 0.51
LMX1B-203ENST00000526117 CCDC186Q7Z3E2 898 aa18.22■□□□□ 0.51
LMX1B-203ENST00000526117 FAM71AQ8IYT1 594 aa18.22■□□□□ 0.51
LMX1B-203ENST00000526117 MAB21L3Q8N8X9 362 aa18.22■□□□□ 0.51
LMX1B-203ENST00000526117 RPP25Q9BUL9 199 aaKnown RBP18.22■□□□□ 0.51
LMX1B-203ENST00000526117 C1QTNF1Q9BXJ1 281 aa18.22■□□□□ 0.51
LMX1B-203ENST00000526117 GANQ9H2C0 597 aa18.22■□□□□ 0.51
LMX1B-203ENST00000526117 AJAP1Q9UKB5 411 aaPredicted RBP18.22■□□□□ 0.51
LMX1B-203ENST00000526117 TRAV19A0A0A6YYK7 116 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 MED7O43513 233 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 GPR37L1O60883 481 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 USP17L7P0C7H9 530 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 PSMC3P17980 439 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 RPL34P49207 117 aaKnown RBP18.21■□□□□ 0.51
LMX1B-203ENST00000526117 PSEN1P49768 467 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 TPM4P67936 248 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 SLC7A9P82251 487 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 PDE4CQ08493 712 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 TXNDC8Q6A555 127 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 VITQ6UXI7 678 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 TRIM67Q6ZTA4 783 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 GPRIN1Q7Z2K8 1008 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 BMP8AQ7Z5Y6 402 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 PIGZQ86VD9 579 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 CELF5Q8N6W0 485 aaKnown RBP18.21■□□□□ 0.51
LMX1B-203ENST00000526117 SLC35F5Q8WV83 523 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 ASIC4Q96FT7 647 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 KXD1Q9BQD3 176 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 LSM14BQ9BX40 385 aaKnown RBP18.21■□□□□ 0.51
LMX1B-203ENST00000526117 STK33Q9BYT3 514 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 EPHX3Q9H6B9 360 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 RTN4Q9NQC3 1192 aaKnown RBP18.21■□□□□ 0.51
LMX1B-203ENST00000526117 TDP1Q9NUW8 608 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 WNT16Q9UBV4 365 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 FHOD1Q9Y613 1164 aa18.21■□□□□ 0.51
LMX1B-203ENST00000526117 A0A1B0GTH6 734 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 HEPACAM2A8MVW5 462 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 PRAMEF12O95522 483 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 BRD2P25440 801 aaKnown RBP18.2■□□□□ 0.5
LMX1B-203ENST00000526117 GNA15P30679 374 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms