RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 HEPACAM2A8MVW5 462 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 ZDHHC11BP0C7U3 371 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 PFKLP17858 780 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 PSMC3P17980 439 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 APBA1Q02410 837 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 FCHO2Q0JRZ9 810 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 KCNMA1Q12791 1236 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 KRT31Q15323 416 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 TFAP2BQ92481 460 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 SLC22A12Q96S37 553 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 LRFN3Q9BTN0 628 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 NAT10Q9H0A0 1025 aaKnown RBP20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 TRPM5Q9NZQ8 1165 aa20.91■□□□□ 0.94
EXOSC4-202ENST00000525936 PATJQ8NI35 1801 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 C2orf78A6NCI8 922 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 O00370 1275 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 ZNF268Q14587 947 aaPredicted RBP20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 SKOR2Q2VWA4 1001 aaPredicted RBP20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 PKDCCQ504Y2 493 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 SGO2Q562F6 1265 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 GJB7Q6PEY0 223 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 GPRIN1Q7Z2K8 1008 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 TTC30AQ86WT1 665 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 GPIHBP1Q8IV16 184 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 RBBP8NLQ8NC74 664 aaPredicted RBP20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 DEPDC1BQ8WUY9 529 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 USP13Q92995 863 aaPredicted RBP20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 SLITRK1Q96PX8 696 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 CYP2S1Q96SQ9 504 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 LIMA1Q9UHB6 759 aaKnown RBP20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 USP3Q9Y6I4 520 aa20.9■□□□□ 0.94
EXOSC4-202ENST00000525936 OLFM2O95897 454 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 AVPR1AP37288 418 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 KIF11P52732 1056 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 MFAP3P55082 362 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 CNGA2Q16280 664 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 LCLAT1Q6UWP7 414 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 HFE2Q6ZVN8 426 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 APTXQ7Z2E3 356 aaKnown RBP20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 DHX40Q8IX18 779 aaKnown RBP20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 CELF5Q8N6W0 485 aaKnown RBP20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 PDZD8Q8NEN9 1154 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 TRMT61BQ9BVS5 477 aaKnown RBP20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 SMG9Q9H0W8 520 aaKnown RBP20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 FBXO44Q9H4M3 255 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 TRPV5Q9NQA5 729 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 TDP1Q9NUW8 608 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 TAB2Q9NYJ8 693 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 CHORDC1Q9UHD1 332 aaPredicted RBP20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 TSPAN16Q9UKR8 245 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 SCML2Q9UQR0 700 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 CCL26Q9Y258 94 aa20.89■□□□□ 0.93
EXOSC4-202ENST00000525936 SYCE3A1L190 88 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 KRBA1A5PL33 1030 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 BECN2A8MW95 431 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 ARNTLO00327 626 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 OAS1P00973 400 aaKnown RBP20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 CFHP08603 1231 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 CD19P15391 556 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 PGFP49763 221 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 RAB41Q5JT25 222 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 IER5LQ5T953 404 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 SHC3Q92529 594 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 FBXO32Q969P5 355 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 RNF38Q9H0F5 515 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 MYH10P35580 1976 aa20.88■□□□□ 0.93
EXOSC4-202ENST00000525936 TRAV19A0A0A6YYK7 116 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 USP17L7P0C7H9 530 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 TCF3P15923 654 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 HDCP19113 662 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 PFKPQ01813 784 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 GRM2Q14416 872 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 STILQ15468 1287 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 GOLGA7BQ2TAP0 167 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 AOPEPQ8N6M6 819 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 ARL14EPQ8N8R7 260 aaPredicted RBP20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 PBXIP1Q96AQ6 731 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 VPS16Q9H269 839 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 KIF9Q9HAQ2 790 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 AJAP1Q9UKB5 411 aaPredicted RBP20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 ZDBF2Q9HCK1 2354 aa20.87■□□□□ 0.93
EXOSC4-202ENST00000525936 TULP2O00295 520 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 XPO1O14980 1071 aaKnown RBP20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 CHADO15335 359 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 PDGFBP01127 241 aaPredicted RBP20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 CALCAP01258 141 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 ZNF165P49910 485 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 TUBP50607 506 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 PDE6CP51160 858 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 COPB1P53618 953 aaKnown RBP20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 BCAT1P54687 386 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 SLC7A9P82251 487 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 ZXDBP98169 803 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 PDE4CQ08493 712 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 IFRD2Q12894 506 aaPredicted RBP20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 IQCB1Q15051 598 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 KLHDC7AQ5VTJ3 777 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 PIGZQ86VD9 579 aa20.86■□□□□ 0.93
EXOSC4-202ENST00000525936 RIN3Q8TB24 985 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms