RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 MAATS1Q7Z4T9 603 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 CCDC150Q8NCX0 1101 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 Q8TCH9 128 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 ZNF483Q8TF39 744 aaPredicted RBP5.42□□□□□ -1.54
CD44-220ENST00000525688 TRAPPC12Q8WVT3 735 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 GOLGA1Q92805 767 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 EDAQ92838 391 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 TEPSINQ96N21 525 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 RBM15Q96T37 977 aaKnown RBP eCLIP5.42□□□□□ -1.54
CD44-220ENST00000525688 TMEM120AQ9BXJ8 343 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 OBP2BQ9NPH6 170 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 SAGE1Q9NXZ1 904 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 DNMT3BQ9UBC3 853 aaKnown RBP5.42□□□□□ -1.54
CD44-220ENST00000525688 USP15Q9Y4E8 981 aaPredicted RBP5.42□□□□□ -1.54
CD44-220ENST00000525688 PCDHGB3Q9Y5G1 929 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.42□□□□□ -1.54
CD44-220ENST00000525688 LRRC9Q6ZRR7 1453 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 CDC42BPAQ5VT25 1732 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 ZMYM4Q5VZL5 1548 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 SPATA31A3Q5VYP0 1347 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 CCNB3Q8WWL7 1395 aa5.42□□□□□ -1.54
CD44-220ENST00000525688 NCOA2Q15596 1464 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 MAGI2Q86UL8 1455 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 CCDC78A2IDD5 438 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 LGALS16A8MUM7 142 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 GRXCR1A8MXD5 290 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 RAB27BO00194 218 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 CLGNO14967 610 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 TRIM24O15164 1050 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 MTA2O94776 668 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 SUN1O94901 812 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 SPATA31D3P0C874 917 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 VEGFAP15692 232 aaPredicted RBP5.41□□□□□ -1.54
CD44-220ENST00000525688 TPH1P17752 444 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 FGFR4P22455 802 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 GCLCP48506 637 aaPredicted RBP5.41□□□□□ -1.54
CD44-220ENST00000525688 LOXL3P58215 753 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 TBX2Q13207 712 aaPredicted RBP5.41□□□□□ -1.54
CD44-220ENST00000525688 MAPKAPK3Q16644 382 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 GGT6Q6P531 493 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 Q6ZRM9 215 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 LRRC55Q6ZSA7 311 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 SPATA31D4Q6ZUB0 917 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 CHCHD4Q8N4Q1 142 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 ZNF808Q8N4W9 903 aaPredicted RBP5.41□□□□□ -1.54
CD44-220ENST00000525688 IL17REQ8NFR9 667 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 FAM71BQ8TC56 605 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 SMCR8Q8TEV9 937 aaPredicted RBP5.41□□□□□ -1.54
CD44-220ENST00000525688 EID2BQ96D98 161 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 TBATAQ96M53 351 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 TTYH3Q9C0H2 523 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 ISY1Q9ULR0 285 aaKnown RBP5.41□□□□□ -1.54
CD44-220ENST00000525688 JAG2Q9Y219 1238 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 GPR52Q9Y2T5 361 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 CDY1Q9Y6F8 540 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 ABCC1P33527 1531 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 ARHGEF12Q9NZN5 1544 aa5.41□□□□□ -1.54
CD44-220ENST00000525688 KIAA1107Q9UPP5 1409 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 ZNF518AQ6AHZ1 1483 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 A0A1W2PS29 197 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 A6NCN8 305 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 AQP7P3A6NL99 342 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 H7C4K7 107 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 ZNF185O15231 689 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 PRICKLE3O43900 615 aaPredicted RBP5.4□□□□□ -1.54
CD44-220ENST00000525688 ZNF623O75123 536 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 AGR2O95994 175 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 ITGA5P08648 1049 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 EGR1P18146 543 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 ACO1P21399 889 aaKnown RBP5.4□□□□□ -1.54
CD44-220ENST00000525688 RXRGP48443 463 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 PTDSS1P48651 473 aaKnown RBP5.4□□□□□ -1.54
CD44-220ENST00000525688 PXNP49023 591 aaPredicted RBP5.4□□□□□ -1.54
CD44-220ENST00000525688 CLK1P49759 484 aaKnown RBP5.4□□□□□ -1.54
CD44-220ENST00000525688 ANXA11P50995 505 aaKnown RBP5.4□□□□□ -1.54
CD44-220ENST00000525688 SCNN1GP51170 649 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 DGKEP52429 567 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 ZNF134P52741 427 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 RNASE9P60153 205 aaKnown RBP5.4□□□□□ -1.54
CD44-220ENST00000525688 SATB1Q01826 763 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 OCA2Q04671 838 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 PPFIA1Q13136 1202 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 ZNF750Q32MQ0 723 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 ZIK1Q3SY52 487 aaPredicted RBP5.4□□□□□ -1.54
CD44-220ENST00000525688 SPECC1Q5M775 1068 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 LCNL1Q6ZST4 164 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 ZNF280BQ86YH2 543 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 MAPKAPK5Q8IW41 473 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 AFAP1Q8N556 730 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 NSUN7Q8NE18 718 aaKnown RBP5.4□□□□□ -1.54
CD44-220ENST00000525688 LTV1Q96GA3 475 aaPredicted RBP5.4□□□□□ -1.54
CD44-220ENST00000525688 NELL2Q99435 816 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 MAGEH1Q9H213 219 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 DACT1Q9NYF0 836 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 IGSF9Q9P2J2 1179 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 CFDP1Q9UEE9 299 aaPredicted RBP5.4□□□□□ -1.54
CD44-220ENST00000525688 TBC1D30Q9Y2I9 924 aa5.4□□□□□ -1.54
CD44-220ENST00000525688 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms