RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 A0A1W2PS29 197 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 POM121BA6NF01 834 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 PYCARD-AS1I3L0S3 204 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 RGS10O43665 173 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 IL18RAPO95256 599 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 PARP1P09874 1014 aaKnown RBP4.65□□□□□ -1.67
CD44-219ENST00000525685 VIPR2P41587 438 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 RARRES1P49788 294 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 LOXL3P58215 753 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 LILRA4P59901 499 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 HLXQ14774 488 aaPredicted RBP4.65□□□□□ -1.67
CD44-219ENST00000525685 PLA1AQ53H76 456 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 ZNF362Q5T0B9 420 aaPredicted RBP4.65□□□□□ -1.67
CD44-219ENST00000525685 RBM20Q5T481 1227 aaKnown RBP4.65□□□□□ -1.67
CD44-219ENST00000525685 ARHGAP40Q5TG30 622 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 DCAF12L1Q5VU92 463 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 SYCE2Q6PIF2 218 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 RNF44Q7L0R7 432 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 SESTD1Q86VW0 696 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 YAF2Q8IY57 180 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 SDR16C5Q8N3Y7 309 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 CAGE1Q8TC20 777 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 SPSB4Q96A44 273 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 NMD3Q96D46 503 aaKnown RBP4.65□□□□□ -1.67
CD44-219ENST00000525685 PPP1R9BQ96SB3 815 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 MPHOSPH6Q99547 160 aaKnown RBP4.65□□□□□ -1.67
CD44-219ENST00000525685 NAA15Q9BXJ9 866 aaKnown RBP4.65□□□□□ -1.67
CD44-219ENST00000525685 SERHLQ9NQF3 203 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 TBC1D23Q9NUY8 699 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 STK32BQ9NY57 414 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 ETAA1Q9NY74 926 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 VSX1Q9NZR4 365 aaPredicted RBP4.65□□□□□ -1.67
CD44-219ENST00000525685 TLK1Q9UKI8 766 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 PHTF1Q9UMS5 762 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.65□□□□□ -1.67
CD44-219ENST00000525685 COL11A2P13942 1736 aaPredicted RBP4.65□□□□□ -1.67
CD44-219ENST00000525685 SPATA31A6Q5VVP1 1343 aa4.65□□□□□ -1.67
CD44-219ENST00000525685 EIF2AK4Q9P2K8 1649 aaKnown RBP4.64□□□□□ -1.67
CD44-219ENST00000525685 ADGRL2O95490 1459 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 A0A087WWL8 130 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 TRIM43BA6NCK2 446 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 MASP2O00187 686 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 RAB27BO00194 218 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 MGST3O14880 152 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 RASAL1O95294 804 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 KLRC1P26715 233 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 LRPAP1P30533 357 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 STT3AP46977 705 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 PRIM2P49643 509 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 C21orf58P58505 322 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 MRPS35P82673 323 aaKnown RBP4.64□□□□□ -1.67
CD44-219ENST00000525685 MRPS21P82921 87 aaKnown RBP4.64□□□□□ -1.67
CD44-219ENST00000525685 GRM1Q13255 1194 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 DAG1Q14118 895 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 UBE4AQ14139 1066 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 E2F2Q14209 437 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 SLC29A2Q14542 456 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 INSCQ1MX18 579 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 CACHD1Q5VU97 1274 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 SP5Q6BEB4 398 aaPredicted RBP4.64□□□□□ -1.67
CD44-219ENST00000525685 SFRP4Q6FHJ7 346 aaPredicted RBP4.64□□□□□ -1.67
CD44-219ENST00000525685 UNC13DQ70J99 1090 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 PPP1R32Q7Z5V6 425 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 SRLQ86TD4 932 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 FAM186BQ8IYM0 893 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 CCDC150Q8NCX0 1101 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 SLC30A5Q8TAD4 765 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 SSH3Q8TE77 659 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 TRIM43Q96BQ3 446 aaPredicted RBP4.64□□□□□ -1.67
CD44-219ENST00000525685 IQCDQ96DY2 449 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 FBXL20Q96IG2 436 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 LRIG1Q96JA1 1093 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 PDLIM2Q96JY6 352 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 NELL2Q99435 816 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 ELAC2Q9BQ52 826 aaKnown RBP4.64□□□□□ -1.67
CD44-219ENST00000525685 DUSP26Q9BV47 211 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 SMURF2Q9HAU4 748 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 ZNF212Q9UDV6 495 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 MROH1Q8NDA8 1641 aa4.64□□□□□ -1.67
CD44-219ENST00000525685 RNF17Q9BXT8 1623 aaKnown RBP4.64□□□□□ -1.67
CD44-219ENST00000525685 PTPRKQ15262 1439 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 ARHGEF17Q96PE2 2063 aaPredicted RBP4.63□□□□□ -1.67
CD44-219ENST00000525685 DUOX2Q9NRD8 1548 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 MBD3L4A6NDZ8 208 aaPredicted RBP4.63□□□□□ -1.67
CD44-219ENST00000525685 MBD3L3A6NE82 208 aaPredicted RBP4.63□□□□□ -1.67
CD44-219ENST00000525685 THAP12O43422 761 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 PEX1O43933 1283 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 INMTO95050 263 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 SLC5A1P13866 664 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 GATA3P23771 443 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 CARSP49589 748 aaKnown RBP4.63□□□□□ -1.67
CD44-219ENST00000525685 ITGA8P53708 1063 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 WNT3P56703 355 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 BIRC2Q13490 618 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 BOP1Q14137 746 aaKnown RBP4.63□□□□□ -1.67
CD44-219ENST00000525685 SF3B3Q15393 1217 aaKnown RBP4.63□□□□□ -1.67
CD44-219ENST00000525685 COLEC12Q5KU26 742 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 ICE2Q659A1 982 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 DPP9Q86TI2 863 aa4.63□□□□□ -1.67
CD44-219ENST00000525685 SPARTQ8N0X7 666 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms