RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 SDCBP2Q9H190 292 aa11.13□□□□□ -0.63
RBBP4-216ENST00000525506 NUP62CLQ9H1M0 184 aa11.13□□□□□ -0.63
RBBP4-216ENST00000525506 EBF3Q9H4W6 596 aa11.13□□□□□ -0.63
RBBP4-216ENST00000525506 C8orf33Q9H7E9 229 aaPredicted RBP11.13□□□□□ -0.63
RBBP4-216ENST00000525506 HPS4Q9NQG7 708 aa11.13□□□□□ -0.63
RBBP4-216ENST00000525506 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.13□□□□□ -0.631e-6■■■■■ 104.1
RBBP4-216ENST00000525506 PRMT8Q9NR22 394 aaPredicted RBP11.13□□□□□ -0.63
RBBP4-216ENST00000525506 TDP1Q9NUW8 608 aa11.13□□□□□ -0.63
RBBP4-216ENST00000525506 C2orf42Q9NWW7 574 aa11.13□□□□□ -0.63
RBBP4-216ENST00000525506 EHD2Q9NZN4 543 aa11.13□□□□□ -0.63
RBBP4-216ENST00000525506 UXTQ9UBK9 157 aaPredicted RBP11.13□□□□□ -0.63
RBBP4-216ENST00000525506 RWDD2AQ9UIY3 292 aa11.13□□□□□ -0.63
RBBP4-216ENST00000525506 FBXO4Q9UKT5 387 aa11.13□□□□□ -0.63
RBBP4-216ENST00000525506 GPR179Q6PRD1 2367 aa11.13□□□□□ -0.63
RBBP4-216ENST00000525506 ZNF292O60281 2723 aa11.13□□□□□ -0.63
RBBP4-216ENST00000525506 A8MXQ7 604 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 F8VP50 259 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 BIN1O00499 593 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 TRIM66O15016 1216 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 DDX6P26196 483 aaKnown RBP eCLIP11.12□□□□□ -0.63
RBBP4-216ENST00000525506 SATB1Q01826 763 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 CAMK4Q16566 473 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 ITPRIPL2Q3MIP1 535 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 ZNF528Q3MIS6 628 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 NAIF1Q69YI7 327 aaPredicted RBP11.12□□□□□ -0.63
RBBP4-216ENST00000525506 SMYD5Q6GMV2 418 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 KLHL10Q6JEL2 608 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 ZC3H14Q6PJT7 736 aaKnown RBP11.12□□□□□ -0.63
RBBP4-216ENST00000525506 DCLK2Q8N568 766 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 ARL14EPQ8N8R7 260 aaPredicted RBP11.12□□□□□ -0.63
RBBP4-216ENST00000525506 SUMF1Q8NBK3 374 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 CHFRQ96EP1 664 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 EEF2KMTQ96G04 330 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 FAM83CQ9BQN1 747 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 B3GNT5Q9BYG0 378 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 ZNF518BQ9C0D4 1074 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 THG1LQ9NWX6 298 aaKnown RBP11.12□□□□□ -0.63
RBBP4-216ENST00000525506 RAB20Q9NX57 234 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 DACH1Q9UI36 760 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 CTNND2Q9UQB3 1225 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 SDK1Q7Z5N4 2213 aa11.12□□□□□ -0.63
RBBP4-216ENST00000525506 ATP8B3O60423 1300 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 EML5Q05BV3 1969 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 TRAV19A0A0A6YYK7 116 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 MBD3O95983 291 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 TDGF1P13385 188 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 PFKLP17858 780 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 ANXA13P27216 316 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 ERCC5P28715 1186 aaPredicted RBP11.11□□□□□ -0.63
RBBP4-216ENST00000525506 MLLT6P55198 1093 aaPredicted RBP11.11□□□□□ -0.63
RBBP4-216ENST00000525506 PLCB2Q00722 1185 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 DMWDQ09019 674 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 CETN1Q12798 172 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 IFRD2Q12894 506 aaPredicted RBP11.11□□□□□ -0.63
RBBP4-216ENST00000525506 ORC1Q13415 861 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 RUNX3Q13761 415 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 DCAF17Q5H9S7 520 aaPredicted RBP11.11□□□□□ -0.63
RBBP4-216ENST00000525506 ISM2Q6H9L7 571 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 SPOPLQ6IQ16 392 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 RBM43Q6ZSC3 357 aaKnown RBP11.11□□□□□ -0.63
RBBP4-216ENST00000525506 RALGPS2Q86X27 583 aaPredicted RBP11.11□□□□□ -0.63
RBBP4-216ENST00000525506 CRYBG2Q8N1P7 616 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 ATRIPQ8WXE1 791 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 C8orf48Q96LL4 319 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 HINFPQ9BQA5 517 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 SEMA4AQ9H3S1 761 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 ZSCAN32Q9NX65 697 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 GCNT4Q9P109 453 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 KIAA1549LQ6ZVL6 1849 aa11.11□□□□□ -0.63
RBBP4-216ENST00000525506 DMXL1Q9Y485 3027 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 CILPO75339 1184 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 ABL1P00519 1130 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 CKMP06732 381 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 USP17L7P0C7H9 530 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 CCDC192P0DO97 292 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 HDCP19113 662 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 PPP3CCP48454 512 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 FMO5P49326 533 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 ZXDBP98169 803 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 MTF1Q14872 753 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 ZNF77Q15935 545 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 CCDC40Q4G0X9 1142 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 CBWD6Q4V339 395 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 CBWD3Q5JTY5 395 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 CBWD5Q5RIA9 395 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 TCERG1LQ5VWI1 586 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 CC2D1AQ6P1N0 951 aaPredicted RBP11.1□□□□□ -0.63
RBBP4-216ENST00000525506 PKN3Q6P5Z2 889 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 DENND5BQ6ZUT9 1274 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 TRIM59Q8IWR1 403 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 KIAA2013Q8IYS2 634 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 ZBTB44Q8NCP5 570 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 NELL1Q92832 810 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 SMARCD1Q96GM5 515 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 KCNK16Q96T55 309 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 MED10Q9BTT4 135 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 TTLL2Q9BWV7 592 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 MMRN2Q9H8L6 949 aa11.1□□□□□ -0.63
RBBP4-216ENST00000525506 APOBEC3GQ9HC16 384 aaKnown RBP11.1□□□□□ -0.63
RBBP4-216ENST00000525506 POLR3BQ9NW08 1133 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms