RNA–Protein interactions for RNA: ENST00000525359.1

CLNS1A-203, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-203ENST00000525359 INO80BQ9C086 356 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-203ENST00000525359 DHX36Q9H2U1 1008 aaKnown RBP3.31□□□□□ -1.88
CLNS1A-203ENST00000525359 FAM83DQ9H4H8 585 aa3.31□□□□□ -1.88
CLNS1A-203ENST00000525359 ATP6V0A4Q9HBG4 840 aa3.31□□□□□ -1.88
CLNS1A-203ENST00000525359 GBA2Q9HCG7 927 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-203ENST00000525359 AMFRQ9UKV5 643 aa3.31□□□□□ -1.88
CLNS1A-203ENST00000525359 CDY1Q9Y6F8 540 aa3.31□□□□□ -1.88
CLNS1A-203ENST00000525359 POC1B-GALNT4F8VUJ3 575 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 CES2O00748 559 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 EXOC3O60645 756 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 SNX2O60749 519 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 SRGAP2O75044 1071 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 GCATO75600 419 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 RNF8O76064 485 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 CSF1RP07333 972 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 CHRM5P08912 532 aaPredicted RBP3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 CD19P15391 556 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 TPH1P17752 444 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 PEX2P28328 305 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 PROK1P58294 105 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 SP2Q02086 613 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 FOXF2Q12947 444 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 ARHGEF7Q14155 803 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 GBX1Q14549 363 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 CHST15Q7LFX5 561 aaPredicted RBP3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 WDR75Q8IWA0 830 aaKnown RBP3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 SFTPA1Q8IWL2 248 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 GALNT4Q8N4A0 578 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 TERB1Q8NA31 727 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 PNLDC1Q8NA58 520 aaKnown RBP3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 FAM156AQ8NDB6 213 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 CYP2W1Q8TAV3 490 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 DNAJB14Q8TBM8 379 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 TMEM171Q8WVE6 324 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 SMG7Q92540 1137 aaKnown RBP3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 CCDC136Q96JN2 1154 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 ASB2Q96Q27 587 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 SNX18Q96RF0 628 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 PCGF6Q9BYE7 350 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 CIPCQ9C0C6 399 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 NUP62CLQ9H1M0 184 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 SMURF2Q9HAU4 748 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 TRIM36Q9NQ86 728 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 CPNE7Q9UBL6 633 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 ITGB1BP2Q9UKP3 347 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 GABRQQ9UN88 632 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 DRG1Q9Y295 367 aaKnown RBP3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 SNX14Q9Y5W7 946 aa3.3□□□□□ -1.88
CLNS1A-203ENST00000525359 USP19O94966 1318 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 TMEM233B4DJY2 109 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 PRRT4C9JH25 899 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 AP4M1O00189 453 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 TPP1O14773 563 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 TMPRSS11DO60235 418 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 PIAS2O75928 621 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 TUBB4AP04350 444 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 CELA2AP08217 269 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 MYF5P13349 255 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 KELP23276 732 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 ACVR2AP27037 513 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 GKP32189 559 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 PTDSS1P48651 473 aaKnown RBP3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 CPT1AP50416 773 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 PLCD1P51178 756 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 CYP4F2P78329 520 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 E2F1Q01094 437 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 FMO1Q01740 532 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 PROSER3Q2NL68 480 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 ZIK1Q3SY52 487 aaPredicted RBP3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 SLC9A4Q6AI14 798 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 KIRREL2Q6UWL6 708 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 MICU3Q86XE3 530 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 OR56A3Q8NH54 315 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 VPS50Q96JG6 964 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 CCDC17Q96LX7 622 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 STRBPQ96SI9 672 aaKnown RBP3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 VN1R3Q9BXE9 311 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 TRIM5Q9C035 493 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 BTBD1Q9H0C5 482 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 NKX1-2Q9UD57 310 aaPredicted RBP3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 SERGEFQ9UGK8 458 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 MAFFQ9ULX9 164 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 SNX13Q9Y5W8 968 aa3.29□□□□□ -1.88
CLNS1A-203ENST00000525359 BTBD19C9JJ37 291 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 TMEM232C9JQI7 657 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 H7C4K7 107 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 RAB27BO00194 218 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 PPP6CO00743 305 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 ZNF213O14771 459 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 CD3EAPO15446 510 aaKnown RBP3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 RRP9O43818 475 aaKnown RBP3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 TXNP10599 105 aaKnown RBP3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 CYP2D6P10635 497 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 CREB1P16220 341 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 CTGFP29279 349 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 UQCRC1P31930 480 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 GATMP50440 423 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 PGDP52209 483 aa3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 RPS16P62249 146 aaKnown RBP3.28□□□□□ -1.88
CLNS1A-203ENST00000525359 STK3Q13188 491 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms