RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ALDH7A1P49419 539 aaKnown RBP3.71□□□□□ -1.82
CSDE1-209ENST00000525132 NEK2P51955 445 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 ITKQ08881 620 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 STRN3Q13033 797 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 PAK1Q13153 545 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 HLTFQ14527 1009 aaKnown RBP eCLIP3.71□□□□□ -1.82
CSDE1-209ENST00000525132 RALBP1Q15311 655 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 TARBP2Q15633 366 aaKnown RBP3.71□□□□□ -1.82
CSDE1-209ENST00000525132 PLK5Q496M5 336 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 PARP10Q53GL7 1025 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 PHF19Q5T6S3 580 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 FSTL4Q6MZW2 842 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 KSR2Q6VAB6 950 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 WDR5BQ86VZ2 330 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 ERICH1Q86X53 443 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 LRRC56Q8IYG6 542 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-209ENST00000525132 AHI1Q8N157 1196 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 ARL14EPQ8N8R7 260 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-209ENST00000525132 CLEC4DQ8WXI8 215 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 NDRG1Q92597 394 aaKnown RBP3.71□□□□□ -1.82
CSDE1-209ENST00000525132 ALG3Q92685 438 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 P2RX5Q93086 422 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 IL17RAQ96F46 866 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 NOX5Q96PH1 765 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 SYT3Q9BQG1 590 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 GORASP1Q9BQQ3 440 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 ORAI3Q9BRQ5 295 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 CELF4Q9BZC1 486 aaKnown RBP3.71□□□□□ -1.82
CSDE1-209ENST00000525132 CCDC8Q9H0W5 538 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-209ENST00000525132 UPF3AQ9H1J1 476 aaKnown RBP3.71□□□□□ -1.82
CSDE1-209ENST00000525132 SLC12A5Q9H2X9 1139 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 AASDHPPTQ9NRN7 309 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 INTS7Q9NVH2 962 aaKnown RBP3.71□□□□□ -1.82
CSDE1-209ENST00000525132 DTLQ9NZJ0 730 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 MYOTQ9UBF9 498 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 SFMBT1Q9UHJ3 866 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 PHTF1Q9UMS5 762 aa3.71□□□□□ -1.82
CSDE1-209ENST00000525132 MICAL3Q7RTP6 2002 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 FAM47E-STBD1D6RA91 191 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 K7ENP7 123 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 ACOT7O00154 380 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 MAN2B1O00754 1011 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 FYB1O15117 783 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 MTSS1O43312 755 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 MSI1O43347 362 aaKnown RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 DGKIO75912 1065 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 PAX3P23760 479 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 PCSK6P29122 969 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 LIMS1P48059 325 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 NEK4P51957 841 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 ITGA1P56199 1179 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 HDAC4P56524 1084 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 FOXO4P98177 505 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 ADAM9Q13443 819 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 MTMR1Q13613 665 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 BRD3Q15059 726 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 RNF219Q5W0B1 726 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 CREB3L3Q68CJ9 461 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 SP5Q6BEB4 398 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 CAPRIN2Q6IMN6 1127 aaKnown RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 PDXDC1Q6P996 788 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 INO80CQ6PI98 192 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 HHIPL2Q6UWX4 724 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 ETV3LQ6ZN32 361 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 LHFPL2Q6ZUX7 228 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 OVCH1Q7RTY7 1134 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 TGIF2LYQ8IUE0 185 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 SIAH1Q8IUQ4 282 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 PASD1Q8IV76 773 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 NOSTRINQ8IVI9 506 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 HDDC3Q8N4P3 179 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 SAMD3Q8N6K7 520 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 SMARCC2Q8TAQ2 1214 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 PIGOQ8TEQ8 1089 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 UBE2Q2Q8WVN8 375 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 TMEM158Q8WZ71 300 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 MTMR8Q96EF0 704 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 SLC39A13Q96H72 371 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 KAZALD1Q96I82 304 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 LCORQ96JN0 433 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 SMAD5Q99717 465 aaKnown RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 RPP25Q9BUL9 199 aaKnown RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 SEZ6LQ9BYH1 1024 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 AP5M1Q9H0R1 490 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 CHST12Q9NRB3 414 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 NOB1Q9ULX3 412 aaKnown RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 ENTPD4Q9Y227 616 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 COA3Q9Y2R0 106 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 RABGAP1Q9Y3P9 1069 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 NEU2Q9Y3R4 380 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 PCDHB4Q9Y5E5 795 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 PCDHA8Q9Y5H6 950 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 IRAK3Q9Y616 596 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 PRKDCP78527 4128 aaKnown RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 GOLGA4Q13439 2230 aaKnown RBP3.7□□□□□ -1.82
CSDE1-209ENST00000525132 NOTCH4Q99466 2003 aa3.7□□□□□ -1.82
CSDE1-209ENST00000525132 HMGB1P1B2RPK0 211 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-209ENST00000525132 KCNQ3O43525 872 aa3.69□□□□□ -1.82
CSDE1-209ENST00000525132 TRIM13O60858 407 aa3.69□□□□□ -1.82
CSDE1-209ENST00000525132 PPFIA2O75334 1257 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms