RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 SLC30A5Q8TAD4 765 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 RIN3Q8TB24 985 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ZSCAN18Q8TBC5 510 aaPredicted RBP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 SPATA18Q8TC71 538 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ADAMTS19Q8TE59 1207 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 C2orf15Q8WU43 125 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ZNF606Q8WXB4 792 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 CPA5Q8WXQ8 436 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 BAP1Q92560 729 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 EDEM1Q92611 657 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 FGF14Q92915 247 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 FBXO32Q969P5 355 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 WBP2Q969T9 261 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PSMG2Q969U7 264 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 RSPRY1Q96DX4 576 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 FUBP3Q96I24 572 aaKnown RBP eCLIP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PIWIL1Q96J94 861 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 C8orf48Q96LL4 319 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ERGIC2Q96RQ1 377 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PCDHB18PQ96TA0 734 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PHF7Q9BWX1 381 aaPredicted RBP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 SLC46A2Q9BY10 475 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 DUSP16Q9BY84 665 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 STK33Q9BYT3 514 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PLA2G2FQ9BZM2 168 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ULBP1Q9BZM6 244 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 TRIM5Q9C035 493 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PDCL3Q9H2J4 239 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 CCSER2Q9H7U1 834 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 NMUR1Q9HB89 426 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 CSNK1G1Q9HCP0 422 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ABCB6Q9NP58 842 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ASAH2Q9NR71 780 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 SEPT11Q9NVA2 429 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 OSER1Q9NX31 292 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 SMPD4Q9NXE4 827 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 HESX1Q9UBX0 185 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 DPP7Q9UHL4 492 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 CNTN6Q9UQ52 1028 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 CCL26Q9Y258 94 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 ATP8B3O60423 1300 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 COL6A3P12111 3177 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 PRUNE2Q8WUY3 3088 aa4.86□□□□□ -1.63
CHMP4A-202ENST00000524955 A0A1W2PQC6 194 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 FSD2A1L4K1 749 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 LOC730098B7Z3J9 87 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 E5RJQ4 531 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 GOLGA8SH3BPF8 625 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 GRAP2O75791 330 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 CAVIN2O95810 425 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ERBB2P04626 1255 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 GYPCP04921 128 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 PLEKP08567 350 aaPredicted RBP4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 LAMP2P13473 410 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 YWHAQP27348 245 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 CASP14P31944 242 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 KRT9P35527 623 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 GPD2P43304 727 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 PDE6CP51160 858 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ZNF75DP51815 510 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 BCAT1P54687 386 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ADKP55263 362 aaKnown RBP4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ZXDBP98169 803 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 BST2Q10589 180 aaKnown RBP4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ARID5BQ14865 1188 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ASIC2Q16515 512 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 PKDCCQ504Y2 493 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 IER5LQ5T953 404 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 NAA35Q5VZE5 725 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 LCLAT1Q6UWP7 414 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ENOSF1Q7L5Y1 443 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 SCD5Q86SK9 330 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ITIH5Q86UX2 942 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 RNF135Q8IUD6 432 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ARID3BQ8IVW6 561 aaPredicted RBP4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ADHFE1Q8IWW8 467 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 SCUBE3Q8IX30 993 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 SPC24Q8NBT2 197 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 EPS8L1Q8TE68 723 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 SLC35F5Q8WV83 523 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 DDX1Q92499 740 aaKnown RBP4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 FAXDC2Q96IV6 333 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ZFYVE19Q96K21 471 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 SPATA17Q96L03 361 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 LRRC3BQ96PB8 259 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 GCNAQ96QF7 691 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 CPXM1Q96SM3 734 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 UHRF1Q96T88 793 aaPredicted RBP4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 TTYH3Q9C0H2 523 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 RNF38Q9H0F5 515 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 LRRC4Q9HBW1 653 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 GKN1Q9NS71 199 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 TAS2R14Q9NYV8 317 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 MUTYHQ9UIF7 546 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 NAGPAQ9UK23 515 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 NOCTQ9UK39 431 aaKnown RBP4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 CDH7Q9ULB5 785 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 ASB3Q9Y575 518 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 NUMBLQ9Y6R0 609 aa4.85□□□□□ -1.63
CHMP4A-202ENST00000524955 MYO7AQ13402 2215 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms