RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 PODNQ7Z5L7 613 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 MFN1Q8IWA4 741 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 C4orf19Q8IY42 314 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 ULK2Q8IYT8 1036 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 SLC35B2Q8TB61 432 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 VPS11Q9H270 941 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 FBXO40Q9UH90 709 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 A6NJR5 290 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 CCNFP41002 786 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 HSD17B4P51659 736 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 MCL1Q07820 350 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 C16orf46Q6P387 395 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 RSPH3Q86UC2 560 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 PHF13Q86YI8 300 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-202ENST00000524773 SCUBE1Q8IWY4 988 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 UNC5BQ8IZJ1 945 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 NETO2Q8NC67 525 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 ANKRD27Q96NW4 1050 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 IQCGQ9H095 443 aaKnown RBP13.75□□□□□ -0.21
CAPN1-202ENST00000524773 ACSS2Q9NR19 701 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 SERPINA10Q9UK55 444 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 SCINQ9Y6U3 715 aa13.75□□□□□ -0.21
CAPN1-202ENST00000524773 hCG_2014768A0A024R1R8 64 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 C3orf70A6NLC5 250 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-202ENST00000524773 C6orf222P0C671 652 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-202ENST00000524773 CD19P15391 556 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 CD1EP15812 388 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 RANBP1P43487 201 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 PDE1BQ01064 536 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 USP4Q13107 963 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 NCOA4Q13772 614 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 CNPY1Q3B7I2 92 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 MROH9Q5TGP6 573 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 STRIP1Q5VSL9 837 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 POLNQ7Z5Q5 900 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 CCDC60Q8IWA6 550 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-202ENST00000524773 PDIK1LQ8N165 341 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-202ENST00000524773 APOL6Q9BWW8 343 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 MTMR12Q9C0I1 747 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 ST6GALNAC4Q9H4F1 302 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 SLC9A2Q9UBY0 812 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 CYTH4Q9UIA0 394 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 MTO1Q9Y2Z2 717 aaKnown RBP13.74□□□□□ -0.21
CAPN1-202ENST00000524773 RIPK3Q9Y572 518 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 MAGEA13PA6NCF6 341 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 WDR64B1ANS9 1081 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 COPEO14579 308 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 GRAP2O75791 330 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 ITGAVP06756 1048 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 EIF3EP60228 445 aaKnown RBP13.74□□□□□ -0.21
CAPN1-202ENST00000524773 MYL6P60660 151 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 DENND1BQ6P3S1 775 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 RNF111Q6ZNA4 994 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 PGLYRP2Q96PD5 576 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 NXF1Q9UBU9 619 aaKnown RBP13.74□□□□□ -0.21
CAPN1-202ENST00000524773 TXNDC9O14530 226 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 OPHN1O60890 802 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 RBP3P10745 1247 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 BAG6P46379 1132 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 SLC18A1P54219 525 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 BPIFB4P59827 614 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 ZNF200P98182 395 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-202ENST00000524773 CDC16Q13042 620 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 CDO1Q16878 200 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 CCDC110Q8TBZ0 833 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 APOPT1Q96IL0 206 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 GORASP1Q9BQQ3 440 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 DHRS4Q9BTZ2 278 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 MSTO1Q9BUK6 570 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 PHACTR1Q9C0D0 580 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 SMYD2Q9NRG4 433 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 SYNPO2Q9UMS6 1093 aa13.74□□□□□ -0.21
CAPN1-202ENST00000524773 LOC100653049A0A140TA62 436 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 MYOCOSA0A1B0GUC4 107 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 TM9SF1O15321 606 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 EXTL3O43909 919 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 LRCH4O75427 683 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 KRT34O76011 436 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 CDH8P55286 799 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 MRPS5P82675 430 aaKnown RBP13.73□□□□□ -0.21
CAPN1-202ENST00000524773 SPDYE2Q495Y8 402 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 ARHGEF16Q5VV41 709 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 MTHFD1LQ6UB35 978 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 DENND5BQ6ZUT9 1274 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 ENOSF1Q7L5Y1 443 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 DEFB132Q7Z7B7 95 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 KCTD6Q8NC69 237 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 SMC1BQ8NDV3 1235 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 SPATA18Q8TC71 538 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 NKD2Q969F2 451 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-202ENST00000524773 ECSITQ9BQ95 431 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 PDGFDQ9GZP0 370 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-202ENST00000524773 GPATCH2LQ9NWQ4 482 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 IL1RAPL1Q9NZN1 696 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 SLX4Q8IY92 1834 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 YDJCA8MPS7 323 aa13.73□□□□□ -0.21
CAPN1-202ENST00000524773 ICAM1P05362 532 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms