RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 FAM102AQ5T9C2 384 aaPredicted RBP9.32□□□□□ -0.92
PKP3-202ENST00000524646 PALM2Q8IXS6 379 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 KIAA0319LQ8IZA0 1049 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 CEP120Q8N960 986 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 C1orf127Q8N9H9 656 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 FAM71DQ8N9W8 422 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 KCTD6Q8NC69 237 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 CFAP61Q8NHU2 1237 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 TCP10LQ8TDR4 215 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 SLC44A1Q8WWI5 657 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 HSPH1Q92598 858 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 USP6NLQ92738 828 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 RTP4Q96DX8 246 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 NLRP4Q96MN2 994 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 ZNF570Q96NI8 536 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 TWNKQ96RR1 684 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 CNPY3Q9BT09 278 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 NFKBIZQ9BYH8 718 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 MIS12Q9H081 205 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 SPATC1LQ9H0A9 340 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 VPS11Q9H270 941 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 TLE6Q9H808 572 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 C10orf88Q9H8K7 445 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 RNPEPL1Q9HAU8 725 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 PNPLA8Q9NP80 782 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 NPHS2Q9NP85 383 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 PRMT7Q9NVM4 692 aaPredicted RBP9.32□□□□□ -0.92
PKP3-202ENST00000524646 ASNSD1Q9NWL6 643 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 PAK5Q9P286 719 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 KANSL3Q9P2N6 904 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 SAE1Q9UBE0 346 aaPredicted RBP9.32□□□□□ -0.92
PKP3-202ENST00000524646 HMGXB4Q9UGU5 601 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 USP18Q9UMW8 372 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 L3MBTL1Q9Y468 752 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 TTLL3Q9Y4R7 772 aa9.32□□□□□ -0.92
PKP3-202ENST00000524646 TCRBV9S1A1TA0A576 114 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 INO80B-WBP1J3KQ70 363 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 LIN7AO14910 233 aaPredicted RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 KIF1CO43896 1103 aaKnown RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 LPXNO60711 386 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 DIAPH2O60879 1101 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 FAM155BO75949 473 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 ENDOD1O94919 500 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 LUC7L3O95232 432 aaKnown RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 ARIH2O95376 493 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 STAU1O95793 577 aaKnown RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 MT-ND3P03897 115 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 HMGCRP04035 888 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 INHBAP08476 426 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 TGM2P21980 687 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 CCNFP41002 786 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 ELK3P41970 407 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 MAGEA6P43360 314 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 CDH6P55285 790 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 YWHAGP61981 247 aaKnown RBP eCLIP9.31□□□□□ -0.92
PKP3-202ENST00000524646 YWHAZP63104 245 aaKnown RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 ZNF200P98182 395 aaPredicted RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 SLC18A2Q05940 514 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 INCA1Q0VD86 236 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 DPYSL3Q14195 570 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 KYAT1Q16773 422 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 FAM187BQ17R55 369 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 TAF1BQ53T94 588 aaPredicted RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 CMPK2Q5EBM0 449 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 CELF3Q5SZQ8 465 aaKnown RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 PRAMEF18Q5VWM3 479 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 FAM91A1Q658Y4 838 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 ZNF449Q6P9G9 518 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 C3orf62Q6ZUJ4 267 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 CYP4V2Q6ZWL3 525 aaPredicted RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 CLNKQ7Z7G1 428 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 NCAPG2Q86XI2 1143 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 ZNF276Q8N554 614 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 TTC39CQ8N584 583 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 ENDOVQ8N8Q3 282 aaKnown RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 FAM13CQ8NE31 585 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 SPATA18Q8TC71 538 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 FBXO41Q8TF61 875 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 TEKT4Q8WW24 435 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 APBB2Q92870 758 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 SKA1Q96BD8 255 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 SLC7A6OSQ96CW6 309 aaPredicted RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 TMEM176AQ96HP8 235 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 FGD4Q96M96 766 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 TSSK1BQ9BXA7 367 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 CALN1Q9BXU9 219 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 TRIM55Q9BYV6 548 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 INO80BQ9C086 356 aaPredicted RBP9.31□□□□□ -0.92
PKP3-202ENST00000524646 BATF3Q9NR55 127 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.31□□□□□ -0.92
PKP3-202ENST00000524646 MKS1Q9NXB0 559 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 SLC5A4Q9NY91 659 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 SLC17A7Q9P2U7 560 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 PCSK1NQ9UHG2 260 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 HAO1Q9UJM8 370 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 TEX264Q9Y6I9 313 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 IKBKGQ9Y6K9 419 aa9.31□□□□□ -0.92
PKP3-202ENST00000524646 C2CD4BA6NLJ0 364 aa9.3□□□□□ -0.92
PKP3-202ENST00000524646 ZNF487B1APH4 448 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms