RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 FRMD8Q9BZ67 464 aaPredicted RBP10.71□□□□□ -0.7
SPIDR-225ENST00000524141 PNPLA8Q9NP80 782 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 SOX13Q9UN79 622 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 PLLPQ9Y342 182 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.7□□□□□ -0.7
SPIDR-225ENST00000524141 KBTBD13C9JR72 458 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 APOC4-APOC2K7ER74 178 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 NFIBO00712 420 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 STAM2O75886 525 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 CCNE2O96020 404 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 APOC2P02655 101 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 YWHAGP61981 247 aaKnown RBP eCLIP10.7□□□□□ -0.7
SPIDR-225ENST00000524141 BST1Q10588 318 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 TAZQ16635 292 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 SLFN12LQ6IEE8 588 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 OR6Y1Q8NGX8 325 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 FAM81AQ8TBF8 368 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 AGBL1Q96MI9 1066 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 ACAP3Q96P50 834 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 FBXO28Q9NVF7 368 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 RBAKQ9NYW8 714 aaPredicted RBP10.7□□□□□ -0.7
SPIDR-225ENST00000524141 TMOD2Q9NZR1 351 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 SIRPGQ9P1W8 387 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 SLC9A2Q9UBY0 812 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 TBC1D30Q9Y2I9 924 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 PCDHA10Q9Y5I2 948 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 TEX264Q9Y6I9 313 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 STYXL1Q9Y6J8 313 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 TCRBV7S3A2A0A539 114 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 TRIM49D1C9J1S8 452 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 E5RJQ4 531 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 CREB3O43889 395 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 CSDE1O75534 798 aaKnown RBP10.7□□□□□ -0.7
SPIDR-225ENST00000524141 PIM1P11309 404 aaPredicted RBP10.7□□□□□ -0.7
SPIDR-225ENST00000524141 PTGER2P43116 358 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 NLRP11P59045 1033 aaKnown RBP10.7□□□□□ -0.7
SPIDR-225ENST00000524141 RPL26P61254 145 aaKnown RBP10.7□□□□□ -0.7
SPIDR-225ENST00000524141 ASPHQ12797 758 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 CBLBQ13191 982 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 HIC1Q14526 733 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 CFAP157Q5JU67 520 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 ANGEL2Q5VTE6 544 aaKnown RBP10.7□□□□□ -0.7
SPIDR-225ENST00000524141 DHDDSQ86SQ9 333 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 CLEC4DQ8WXI8 215 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 NDNQ99608 321 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 CGRRF1Q99675 332 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 DDX50Q9BQ39 737 aaKnown RBP10.7□□□□□ -0.7
SPIDR-225ENST00000524141 CCDC106Q9BWC9 280 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 NDUFA13Q9P0J0 144 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 SAE1Q9UBE0 346 aaPredicted RBP10.7□□□□□ -0.7
SPIDR-225ENST00000524141 NUB1Q9Y5A7 615 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 SCN9AQ15858 1988 aa10.7□□□□□ -0.7
SPIDR-225ENST00000524141 WEE2P0C1S8 567 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 PABPC4LP0CB38 370 aaKnown RBP10.69□□□□□ -0.7
SPIDR-225ENST00000524141 AOC1P19801 751 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 EIF4BP23588 611 aaKnown RBP10.69□□□□□ -0.7
SPIDR-225ENST00000524141 POLR2BP30876 1174 aaKnown RBP10.69□□□□□ -0.7
SPIDR-225ENST00000524141 EIF3EP60228 445 aaKnown RBP10.69□□□□□ -0.7
SPIDR-225ENST00000524141 IRX4P78413 519 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 SLC25A11Q02978 314 aaKnown RBP10.69□□□□□ -0.7
SPIDR-225ENST00000524141 MED21Q13503 144 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 DPYSL3Q14195 570 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 ZYXQ15942 572 aaKnown RBP10.69□□□□□ -0.7
SPIDR-225ENST00000524141 MAP3K21Q5TCX8 1036 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 SMYD5Q6GMV2 418 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 TAS1R3Q7RTX0 852 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 RASSF3Q86WH2 238 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 FNIP1Q8TF40 1166 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 FAM172AQ8WUF8 416 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 JADE3Q92613 823 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 FAM210AQ96ND0 272 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 STN1Q9H668 368 aaKnown RBP10.69□□□□□ -0.7
SPIDR-225ENST00000524141 PPM1HQ9ULR3 514 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 SSX2IPQ9Y2D8 614 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 PTPRJQ12913 1337 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 ZNF646O15015 1829 aaPredicted RBP10.69□□□□□ -0.7
SPIDR-225ENST00000524141 CHADO15335 359 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 BIRC5O15392 142 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 BUD23O43709 281 aaKnown RBP10.69□□□□□ -0.7
SPIDR-225ENST00000524141 KDELR1P24390 212 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 PSMA2P25787 234 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 CDH5P33151 784 aaPredicted RBP10.69□□□□□ -0.7
SPIDR-225ENST00000524141 CCNFP41002 786 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 ACOT2P49753 483 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 AQP5P55064 265 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 WASHC5Q12768 1159 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 NCOA4Q13772 614 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 MAP7Q14244 749 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 PGM5Q15124 567 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 CHI3L2Q15782 390 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 DBN1Q16643 649 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 TEX44Q53QW1 395 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 EFHC1Q5JVL4 640 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 ARCQ7LC44 396 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 PDSS2Q86YH6 399 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 NUDCD3Q8IVD9 361 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 UNC45BQ8IWX7 931 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 FAM71DQ8N9W8 422 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 FBXO27Q8NI29 283 aa10.69□□□□□ -0.7
SPIDR-225ENST00000524141 SYTL5Q8TDW5 730 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms