RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 PDE1AP54750 535 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 POLE2P56282 527 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 NSUN2Q08J23 767 aaKnown RBP eCLIP4.59□□□□□ -1.67
SKP1-212ENST00000523966 GPS1Q13098 491 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 EIF2B5Q13144 721 aaKnown RBP4.59□□□□□ -1.67
SKP1-212ENST00000523966 SPARCL1Q14515 664 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 TBCCQ15814 346 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 PFKFB4Q16877 469 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 PLAC9Q5JTB6 97 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 ERAP2Q6P179 960 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 USP49Q70CQ1 688 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 SPRED1Q7Z699 444 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 DTX2Q86UW9 622 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 GATAD2AQ86YP4 633 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 CCDC28AQ8IWP9 274 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 IZUMO1Q8IYV9 350 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 LNX2Q8N448 690 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 MYCT1Q8N699 235 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 ATG16L2Q8NAA4 619 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 NGDNQ8NEJ9 315 aaKnown RBP4.59□□□□□ -1.67
SKP1-212ENST00000523966 SUPT20HQ8NEM7 779 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 ATG4AQ8WYN0 398 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 CAVIN3Q969G5 261 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 ZNF503Q96F45 646 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 FAM227BQ96M60 508 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 Q96MF0 132 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 PRPF18Q99633 342 aaKnown RBP4.59□□□□□ -1.67
SKP1-212ENST00000523966 ALG8Q9BVK2 526 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 KRTAP3-1Q9BYR8 98 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 SERHL2Q9H4I8 314 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 OBP2BQ9NPH6 170 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 KCTD5Q9NXV2 234 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 DACT1Q9NYF0 836 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 EHD3Q9NZN3 535 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 SSX2IPQ9Y2D8 614 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 MORC2Q9Y6X9 1032 aaPredicted RBP4.59□□□□□ -1.67
SKP1-212ENST00000523966 LGALS16A8MUM7 142 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 C1QTNF3-AMACRE9PGA6 284 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 NPHP1O15259 732 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 ZSCAN9O15535 394 aaPredicted RBP4.58□□□□□ -1.68
SKP1-212ENST00000523966 KCNQ3O43525 872 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 ONECUT2O95948 504 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 VIPP01282 170 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 CHRM2P08172 466 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 ADH4P08319 380 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 HKR1P10072 659 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 EGR2P11161 476 aaPredicted RBP4.58□□□□□ -1.68
SKP1-212ENST00000523966 HGFP14210 728 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 EGR1P18146 543 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 ZFP36P26651 326 aaKnown RBP4.58□□□□□ -1.68
SKP1-212ENST00000523966 UQCRC1P31930 480 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 FOLR3P41439 243 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 GRK6P43250 576 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 TAP1Q03518 808 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 BMPR2Q13873 1038 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 SLC5A9Q2M3M2 681 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 INO80DQ53TQ3 878 aaPredicted RBP4.58□□□□□ -1.68
SKP1-212ENST00000523966 HSP90AB4PQ58FF6 505 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 MIIPQ5JXC2 388 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 ZNF618Q5T7W0 954 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 MANEALQ5VSG8 457 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 KAZNQ674X7 775 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 VWA1Q6PCB0 445 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 CLEC9AQ6UXN8 241 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 KIAA0408Q6ZU52 694 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 ZNF354CQ86Y25 554 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 RASGRP3Q8IV61 690 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 FSTL5Q8N475 847 aaPredicted RBP4.58□□□□□ -1.68
SKP1-212ENST00000523966 FAM109AQ8N4B1 249 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 MYCBPAPQ8TBZ2 947 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 IPO4Q8TEX9 1081 aaKnown RBP4.58□□□□□ -1.68
SKP1-212ENST00000523966 ZNF384Q8TF68 577 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 XAGE5Q8WWM1 108 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 ASB10Q8WXI3 467 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 LPIN2Q92539 896 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 GLG1Q92896 1179 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 FUBP1Q96AE4 644 aaKnown RBP4.58□□□□□ -1.68
SKP1-212ENST00000523966 ZBTB45Q96K62 511 aaPredicted RBP4.58□□□□□ -1.68
SKP1-212ENST00000523966 RMDN3Q96TC7 470 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 C17orf80Q9BSJ5 609 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 MYLK2Q9H1R3 596 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 HELLSQ9NRZ9 838 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 KLC4Q9NSK0 619 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 LRIT1Q9P2V4 623 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 DKK2Q9UBU2 259 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 NKX1-2Q9UD57 310 aaPredicted RBP4.58□□□□□ -1.68
SKP1-212ENST00000523966 CA14Q9ULX7 337 aa4.58□□□□□ -1.68
SKP1-212ENST00000523966 A1L4Q6 167 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 B8ZZF3 427 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 GLP2RO95838 553 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 PRKCBP05771 671 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 CSF1RP07333 972 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 PDHA1P08559 390 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 LIPAP38571 399 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 HNRNPMP52272 730 aaKnown RBP eCLIP4.57□□□□□ -1.681e-11■■■■□ 25
SKP1-212ENST00000523966 ALDH18A1P54886 795 aaKnown RBP4.57□□□□□ -1.68
SKP1-212ENST00000523966 PTK2BQ14289 1009 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 PTPRRQ15256 657 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 NBPF8Q3BBV2 869 aa4.57□□□□□ -1.68
SKP1-212ENST00000523966 TREML2Q5T2D2 321 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms