RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 AVPR1AP37288 418 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 USP46P62068 366 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 TAF10Q12962 218 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 MEA1Q16626 185 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 STXBP5Q5T5C0 1151 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 SNX30Q5VWJ9 437 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 TANGO2Q6ICL3 276 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 BMP8AQ7Z5Y6 402 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 ARID3BQ8IVW6 561 aaPredicted RBP13.27□□□□□ -0.29
VEGFA-225ENST00000523950 MFSD6LQ8IWD5 586 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 CMTM8Q8IZV2 173 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 AOPEPQ8N6M6 819 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 CELF5Q8N6W0 485 aaKnown RBP13.27□□□□□ -0.29
VEGFA-225ENST00000523950 DNASE1L2Q92874 299 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 FBXO32Q969P5 355 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 KXD1Q9BQD3 176 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 SLC46A2Q9BY10 475 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 PLCB1Q9NQ66 1216 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 WNT16Q9UBV4 365 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 TSPAN16Q9UKR8 245 aa13.27□□□□□ -0.29
VEGFA-225ENST00000523950 KIF26AQ9ULI4 1882 aaPredicted RBP13.27□□□□□ -0.29
VEGFA-225ENST00000523950 A0A0C4DFX4 3053 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 ZNF840PA6NDX5 716 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 HEPACAM2A8MVW5 462 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 BECN2A8MW95 431 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 PRR33A8MZF0 331 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 HHLA1C9JL84 531 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 DPYSL4O14531 572 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 XPO1O14980 1071 aaKnown RBP13.26□□□□□ -0.29
VEGFA-225ENST00000523950 USP17L7P0C7H9 530 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 KRT5P13647 590 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 TCF3P15923 654 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 TUBP50607 506 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 COPB1P53618 953 aaKnown RBP13.26□□□□□ -0.29
VEGFA-225ENST00000523950 FCHO2Q0JRZ9 810 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 BST2Q10589 180 aaKnown RBP13.26□□□□□ -0.29
VEGFA-225ENST00000523950 KCNMA1Q12791 1236 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 CNGA2Q16280 664 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 GOLGA7BQ2TAP0 167 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 TMEM31Q5JXX7 168 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 LCLAT1Q6UWP7 414 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 VITQ6UXI7 678 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 KIAA1958Q8N8K9 716 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 MAB21L3Q8N8X9 362 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 SHC3Q92529 594 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 RPP25Q9BUL9 199 aaKnown RBP13.26□□□□□ -0.29
VEGFA-225ENST00000523950 TRMT61BQ9BVS5 477 aaKnown RBP13.26□□□□□ -0.29
VEGFA-225ENST00000523950 VPS16Q9H269 839 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 SIX2Q9NPC8 291 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 TRPV5Q9NQA5 729 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 SCML2Q9UQR0 700 aa13.26□□□□□ -0.29
VEGFA-225ENST00000523950 TMEM221A6NGB7 291 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 LGALS16A8MUM7 142 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 RNF225M0QZC1 329 aaPredicted RBP13.25□□□□□ -0.29
VEGFA-225ENST00000523950 M0R296 226 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 MED7O43513 233 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 NARSO43776 548 aaKnown RBP13.25□□□□□ -0.29
VEGFA-225ENST00000523950 OLFM2O95897 454 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 CKMP06732 381 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 ZDHHC11BP0C7U3 371 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 PSEN1P49768 467 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 KIF11P52732 1056 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 TPM4P67936 248 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 PLCB2Q00722 1185 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 IFRD2Q12894 506 aaPredicted RBP13.25□□□□□ -0.29
VEGFA-225ENST00000523950 ZSCAN23Q3MJ62 389 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 ARHGAP29Q52LW3 1261 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 RAB41Q5JT25 222 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 TXNDC8Q6A555 127 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 PIGZQ86VD9 579 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 TTC30AQ86WT1 665 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 DHX40Q8IX18 779 aaKnown RBP13.25□□□□□ -0.29
VEGFA-225ENST00000523950 YAF2Q8IY57 180 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 SCAMP5Q8TAC9 235 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 BPIFB1Q8TDL5 484 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 IRF7Q92985 503 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 ASIC4Q96FT7 647 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 PLA2G2FQ9BZM2 168 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 HSD3B7Q9H2F3 369 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 TRPC7Q9HCX4 862 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 TLR8Q9NR97 1041 aaKnown RBP13.25□□□□□ -0.29
VEGFA-225ENST00000523950 TDP1Q9NUW8 608 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 DNAJC12Q9UKB3 198 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 FBXL21Q9UKT6 434 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 ARHGAP26Q9UNA1 814 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.25□□□□□ -0.29
VEGFA-225ENST00000523950 USP3Q9Y6I4 520 aa13.25□□□□□ -0.29
VEGFA-225ENST00000523950 MUC3AQ02505 3323 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 ZNF263O14978 683 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 CHADO15335 359 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 PRAMEF12O95522 483 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 OAS1P00973 400 aaKnown RBP13.24□□□□□ -0.29
VEGFA-225ENST00000523950 HDCP19113 662 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 VIPR2P41587 438 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 PLA2G4AP47712 749 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 GPC5P78333 572 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 SLC7A9P82251 487 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 PDE4CQ08493 712 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 IQCB1Q15051 598 aa13.24□□□□□ -0.29
VEGFA-225ENST00000523950 ARHGAP44Q17R89 818 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms