RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 ARHGEF4Q9NR80 690 aa8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 SMPD4Q9NXE4 827 aa8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 GDAP2Q9NXN4 497 aa8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 EHD2Q9NZN4 543 aa8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 ITGA11Q9UKX5 1188 aa8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 KIF3AQ9Y496 699 aa8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 PCDHB9Q9Y5E1 797 aa8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 CPQQ9Y646 472 aa8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 MYH11P35749 1972 aa8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 GCN1Q92616 2671 aaKnown RBP8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 SCN1AP35498 2009 aa8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 NUP205Q92621 2012 aa8.49□□□□□ -1.05
NSMCE2-213ENST00000523824 A0A0A0MRY4 1105 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 TBC1D3BA6NDS4 549 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 GABRDO14764 452 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 SCAMP3O14828 347 aaKnown RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 ZBTB24O43167 697 aaPredicted RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 HCRTO43612 131 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 ADAM23O75077 832 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 ATP2C2O75185 946 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 ADH1CP00326 375 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 LDHAP00338 332 aaKnown RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 SYPP08247 313 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 ADH5P11766 374 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 BDNFP23560 247 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 ADSSP30520 456 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 PPP3CCP48454 512 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 FAM193AP78312 1265 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 SLC7A9P82251 487 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 CYP27A1Q02318 531 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 KDSRQ06136 332 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 MESP2Q0VG99 397 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 SCAPQ12770 1279 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 MYO1EQ12965 1108 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 MAPRE1Q15691 268 aaKnown RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 PREPLQ4J6C6 727 aaPredicted RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 PEAR1Q5VY43 1037 aaPredicted RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 FAM171BQ6P995 826 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 DENND5BQ6ZUT9 1274 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 NUDT18Q6ZVK8 323 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 DPH6Q7L8W6 267 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 ZNF720Q7Z2F6 126 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 TRMT11Q7Z4G4 463 aaKnown RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 RAB44Q7Z6P3 723 aaPredicted RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 MINDY1Q8N5J2 469 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 TOP6BLQ8N6T0 577 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 KIAA1958Q8N8K9 716 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 NOC3LQ8WTT2 800 aaKnown RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 MYLPFQ96A32 169 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 HVCN1Q96D96 273 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 CEP295NLQ96MC4 621 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 SYT15Q9BQS2 421 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 RNF38Q9H0F5 515 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 ST6GALNAC4Q9H4F1 302 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 BLOC1S4Q9NUP1 217 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 RBAKQ9NYW8 714 aaPredicted RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 CFAP97Q9P2B7 532 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 CDH9Q9ULB4 789 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 EXOC7Q9UPT5 735 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 ANK1P16157 1881 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 DENND4CQ5VZ89 1909 aa8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 ASCC3Q8N3C0 2202 aaKnown RBP8.48□□□□□ -1.05
NSMCE2-213ENST00000523824 IGSF10Q6WRI0 2623 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 ZNF840PA6NDX5 716 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 H3BQV1 296 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 SH3BP5O60239 455 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 PDGFRBP09619 1106 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 TMEM191BP0C7N4 346 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 MBL2P11226 248 aaPredicted RBP8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 CD59P13987 128 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 LMO2P25791 158 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 DDIT3P35638 169 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 KIR2DL1P43626 348 aaPredicted RBP8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 WNT7BP56706 349 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 USP46P62068 366 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 PSMC1P62191 440 aaKnown RBP8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 GAD2Q05329 585 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 ZNF33AQ06730 810 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 TRIP6Q15654 476 aaKnown RBP8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 SOWAHAQ2M3V2 549 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 TDRD10Q5VZ19 366 aaKnown RBP8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 BTBD8Q5XKL5 378 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 SCARA3Q6AZY7 606 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 DYMQ7RTS9 669 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 PDZD3Q86UT5 571 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 C12orf40Q86WS4 652 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 SFR1Q86XK3 245 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 DDX42Q86XP3 938 aaKnown RBP eCLIP8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 BRSK2Q8IWQ3 736 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 RGL4Q8IZJ4 473 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 ZNF513Q8N8E2 541 aaPredicted RBP8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 NAT16Q8N8M0 369 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 OR2I1PQ8NGU4 316 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 KCNV2Q8TDN2 545 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 LARP4BQ92615 738 aaKnown RBP8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 SAAL1Q96ER3 474 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 ANKRD36BP1Q96IX9 119 aa8.47□□□□□ -1.05
NSMCE2-213ENST00000523824 CAMK1GQ96NX5 476 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms