RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 SOX10P56693 466 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 BCAR1P56945 870 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 TAP1Q03518 808 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 NCOA4Q13772 614 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 FLOT2Q14254 428 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 PLEKHG4Q58EX7 1191 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 FAM182BQ5T319 152 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 RNASEH2BQ5TBB1 312 aaKnown RBP9.39□□□□□ -0.91
CSMD1-212ENST00000523387 ANKRD22Q5VYY1 191 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 CC2D2BQ6DHV5 1058 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 GRAMD4Q6IC98 578 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 ADGRD1Q6QNK2 874 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 RAPH1Q70E73 1250 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 ARPINQ7Z6K5 226 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 BANPQ8N9N5 519 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 LMO3Q8TAP4 145 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 GFM2Q969S9 779 aaKnown RBP9.39□□□□□ -0.91
CSMD1-212ENST00000523387 MBOAT7Q96N66 472 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 TDRD3Q9H7E2 651 aaKnown RBP9.39□□□□□ -0.91
CSMD1-212ENST00000523387 CAAP1Q9H8G2 361 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 SMYD2Q9NRG4 433 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 TBC1D22BQ9NU19 505 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 DRG1Q9Y295 367 aaKnown RBP9.39□□□□□ -0.91
CSMD1-212ENST00000523387 FER1L4A9Z1Z3 1794 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 ZMPSTE24O75844 475 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 TGDSO95455 350 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 HDAC4P56524 1084 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 ACTR3P61158 418 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 C1QBPQ07021 282 aaKnown RBP9.39□□□□□ -0.91
CSMD1-212ENST00000523387 DCTN2Q13561 401 aaKnown RBP9.39□□□□□ -0.91
CSMD1-212ENST00000523387 SPDYAQ5MJ70 313 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 FNBP1LQ5T0N5 605 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 OR6B2Q6IFH4 312 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 SEPT12Q8IYM1 358 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 LZICQ8WZA0 190 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 KRT82Q9NSB4 513 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 DNAAF2Q9NVR5 837 aaKnown RBP9.39□□□□□ -0.91
CSMD1-212ENST00000523387 ADA2Q9NZK5 511 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 SEPT10Q9P0V9 454 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 GABBR1Q9UBS5 961 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 POLLQ9UGP5 575 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 MAGED2Q9UNF1 606 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-212ENST00000523387 CAPN8A6NHC0 703 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 ZC3H11AO75152 810 aaKnown RBP eCLIP9.39□□□□□ -0.91
CSMD1-212ENST00000523387 CYP3A4P08684 503 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 MX2P20592 715 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 GALK1P51570 392 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 AQP4P55087 323 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 FOLH1Q04609 750 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 GABPAQ06546 454 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 OASLQ15646 514 aaKnown RBP9.39□□□□□ -0.91
CSMD1-212ENST00000523387 STKLD1Q8NE28 680 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 MCPH1Q8NEM0 835 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 ATXN7L3BQ96GX2 97 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 ADPGKQ9BRR6 497 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 GPAMQ9HCL2 828 aa9.39□□□□□ -0.91
CSMD1-212ENST00000523387 GAKO14976 1311 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 TCRBV9S1A1TA0A576 114 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 ANKRD33BA6NCL7 494 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 E9PBE3 544 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 KLHL41O60662 606 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 TNNC2P02585 160 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 ITGA2BP08514 1039 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 KLRC2P26717 231 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 JAK3P52333 1124 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 OSTNP61366 133 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 PRAMEP78395 509 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 FASTKD1Q53R41 847 aaKnown RBP9.38□□□□□ -0.91
CSMD1-212ENST00000523387 AAGABQ6PD74 315 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 ZFPM1Q8IX07 1006 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 DDI1Q8WTU0 396 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 POLR3FQ9H1D9 316 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-212ENST00000523387 SSU72Q9NP77 194 aaKnown RBP9.38□□□□□ -0.91
CSMD1-212ENST00000523387 THAP1Q9NVV9 213 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 HERC5Q9UII4 1024 aaKnown RBP9.38□□□□□ -0.91
CSMD1-212ENST00000523387 FIS1Q9Y3D6 152 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 hCG_1818297A0A087WSY0 165 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 CLRN2A0PK11 232 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 ATP6V1G1O75348 118 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 FAM155BO75949 473 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 TNFAIP8O95379 198 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 ITGAVP06756 1048 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 IL1R1P14778 569 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 PDPK2PQ6A1A2 396 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 TRIM67Q6ZTA4 783 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 GATA6Q92908 595 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 PTCD3Q96EY7 689 aaKnown RBP9.38□□□□□ -0.91
CSMD1-212ENST00000523387 SERAC1Q96JX3 654 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 PANX3Q96QZ0 392 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 PAK5Q9P286 719 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 INPP5FQ9Y2H2 1132 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 CCDC88AQ3V6T2 1871 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 PARP4Q9UKK3 1724 aaKnown RBP9.38□□□□□ -0.91
CSMD1-212ENST00000523387 DDTLA6NHG4 134 aaPredicted RBP9.38□□□□□ -0.91
CSMD1-212ENST00000523387 CYB561D2O14569 222 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 RNASEH1O60930 286 aaKnown RBP9.38□□□□□ -0.91
CSMD1-212ENST00000523387 MAPTP10636 758 aaKnown RBP9.38□□□□□ -0.91
CSMD1-212ENST00000523387 KCNA4P22459 653 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 DSG3P32926 999 aa9.38□□□□□ -0.91
CSMD1-212ENST00000523387 NOMO3P69849 1222 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms