RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 ZNF699Q32M78 642 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 KMT5BQ4FZB7 885 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 ZNF667Q5HYK9 610 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 SYT13Q7L8C5 426 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 CACNA2D4Q7Z3S7 1137 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 SLC9A9Q8IVB4 645 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 KIAA1958Q8N8K9 716 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 KIAA0895Q8NCT3 520 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 CCDC26Q8TAB7 109 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 EZH1Q92800 747 aaPredicted RBP12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 SLITRK1Q96PX8 696 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 RTKNQ9BST9 563 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 SMYD3Q9H7B4 428 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 TMEM30AQ9NV96 361 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 OBSL1O75147 1896 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 A0A1B0GVL5 298 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 DCDC2BA2VCK2 349 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 SLC9A3R1O14745 358 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 AKAP3O75969 853 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 RTN3O95197 1032 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 OLFM2O95897 454 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 NR3C1P04150 777 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 RPN1P04843 607 aaKnown RBP12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 MYL1P05976 194 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 CCDC192P0DO97 292 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 PFKFB1P16118 471 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 YWHAQP27348 245 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 SGSM1Q2NKQ1 1148 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 PRR23CQ6ZRP0 262 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 ADGRG2Q8IZP9 1017 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 NUP93Q8N1F7 819 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 RPLP0P6Q8NHW5 317 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 NETO1Q8TDF5 533 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 ACDQ96AP0 544 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 LOXL4Q96JB6 756 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 TNIP3Q96KP6 325 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 KCNK16Q96T55 309 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 MED10Q9BTT4 135 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 KCTD10Q9H3F6 313 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 POLR3BQ9NW08 1133 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 SMPD4Q9NXE4 827 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 CPQQ9Y646 472 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 ATP8B3O60423 1300 aa12.5□□□□□ -0.41
CTNNA1-237ENST00000523275 SPTBN2O15020 2390 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 SLC30A4O14863 429 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 IKBKBO14920 756 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 AXIN1O15169 862 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 VNN1O95497 513 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 OAS1P00973 400 aaKnown RBP12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 P4HA1P13674 534 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 OPRD1P41143 372 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 RAP1GAPP47736 663 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 DLG4P78352 724 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 IFRD2Q12894 506 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 DMC1Q14565 340 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 PAQR9Q6ZVX9 377 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 FILIP1Q7Z7B0 1213 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 KBTBD6Q86V97 674 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 DDX42Q86XP3 938 aaKnown RBP eCLIP12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 PDZD8Q8NEN9 1154 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 TMC2Q8TDI7 906 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 OVCA2Q8WZ82 227 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 TAF4BQ92750 862 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 ELMO3Q96BJ8 720 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 SPATA32Q96LK8 384 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 HHIPQ96QV1 700 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 CFAP97Q9P2B7 532 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 CHORDC1Q9UHD1 332 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 HPSEQ9Y251 543 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 FRMD4BQ9Y2L6 1034 aa12.49□□□□□ -0.41
CTNNA1-237ENST00000523275 SDK1Q7Z5N4 2213 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 KIF20AO95235 890 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 APBB3O95704 486 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 CYP17A1P05093 508 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 MBL2P11226 248 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 SYKP43405 635 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 KRT85P78386 507 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 DHCR24Q15392 516 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 ZACNQ401N2 412 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 CEP135Q66GS9 1140 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 SCARA5Q6ZMJ2 495 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 SV2AQ7L0J3 742 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 ACOT1Q86TX2 421 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 FAM35AQ86V20 835 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 CRYBG2Q8N1P7 616 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 SCAMP5Q8TAC9 235 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 USP33Q8TEY7 942 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 FBXO32Q969P5 355 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 CCDC47Q96A33 483 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 SMARCD1Q96GM5 515 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 ZC3H10Q96K80 434 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 SDCBP2Q9H190 292 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 ARRDC1-AS1Q9H2J1 176 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 DMAP1Q9NPF5 467 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 COMMD8Q9NX08 183 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 IL37Q9NZH6 218 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 EBF1Q9UH73 591 aa12.48□□□□□ -0.41
CTNNA1-237ENST00000523275 ANAPC1Q9H1A4 1944 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms