RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 GAB4Q2WGN9 574 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 FBXO43Q4G163 708 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 STPG1Q5TH74 334 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 ANO7Q6IWH7 933 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 SYT13Q7L8C5 426 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 CAMKK1Q8N5S9 505 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 XXYLT1Q8NBI6 393 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 TSTD1Q8NFU3 115 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 ACDQ96AP0 544 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 CHAMP1Q96JM3 812 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 B3GNT5Q9BYG0 378 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 LRRC27Q9C0I9 530 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 SMYD3Q9H7B4 428 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 CFAP97Q9P2B7 532 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 TNRC6BQ9UPQ9 1833 aaKnown RBP16.44■□□□□ 0.22
MRPS28-209ENST00000522987 EPG5Q9HCE0 2579 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 CCDC163A0A0D9SF12 145 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 ZNF840PA6NDX5 716 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 K7EQS6 105 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 MBL2P11226 248 aaPredicted RBP16.43■□□□□ 0.22
MRPS28-209ENST00000522987 BCKDHBP21953 392 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 AMPD3Q01432 767 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 ORC1Q13415 861 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 C12orf40Q86WS4 652 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 IQUBQ8NA54 791 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 SPRYD3Q8NCJ5 442 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 PLEKHO2Q8TD55 490 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 USP33Q8TEY7 942 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 EXOC4Q96A65 974 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 C7orf25Q9BPX7 421 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 MED10Q9BTT4 135 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 GZF1Q9H116 711 aaPredicted RBP16.43■□□□□ 0.22
MRPS28-209ENST00000522987 KIAA1586Q9HCI6 787 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.43■□□□□ 0.22
MRPS28-209ENST00000522987 MORC2Q9Y6X9 1032 aaPredicted RBP16.43■□□□□ 0.22
MRPS28-209ENST00000522987 CHD8Q9HCK8 2581 aa16.43■□□□□ 0.22
MRPS28-209ENST00000522987 PPP6R2O75170 966 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 HNRNPLP14866 589 aaKnown RBP eCLIP16.42■□□□□ 0.22
MRPS28-209ENST00000522987 TIE1P35590 1138 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 BIRC3Q13489 604 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 CUL4BQ13620 913 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 ELF2Q15723 593 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 PLA2G2CQ5R387 149 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 N4BP2L1Q5TBK1 243 aaPredicted RBP16.42■□□□□ 0.22
MRPS28-209ENST00000522987 EMC10Q5UCC4 262 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 TDRD10Q5VZ19 366 aaKnown RBP16.42■□□□□ 0.22
MRPS28-209ENST00000522987 UNC13DQ70J99 1090 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 ERLEC1Q96DZ1 483 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 LOXL4Q96JB6 756 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 ZC3H10Q96K80 434 aaKnown RBP16.42■□□□□ 0.22
MRPS28-209ENST00000522987 KCNK16Q96T55 309 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 TTLL2Q9BWV7 592 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 CUEDC2Q9H467 287 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 CHORDC1Q9UHD1 332 aaPredicted RBP16.42■□□□□ 0.22
MRPS28-209ENST00000522987 LAMA1P25391 3075 aa16.42■□□□□ 0.22
MRPS28-209ENST00000522987 EXOC3O60645 756 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 TACC1O75410 805 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 YEATS4O95619 227 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 IRF1P10914 325 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 PDE6CP51160 858 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 DHCR24Q15392 516 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 RNF43Q68DV7 783 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 ALLCQ8N6M5 410 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 NAT16Q8N8M0 369 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 B3GALNT2Q8NCR0 500 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 SCAMP5Q8TAC9 235 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 RLN3Q8WXF3 142 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 FBXO32Q969P5 355 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 WBP2Q969T9 261 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 C8orf48Q96LL4 319 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 SLITRK1Q96PX8 696 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 EDEM2Q9BV94 578 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 SDCBP2Q9H190 292 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 VPS45Q9NRW7 570 aa16.41■□□□□ 0.22
MRPS28-209ENST00000522987 KMT2BQ9UMN6 2715 aaPredicted RBP16.4■□□□□ 0.22
MRPS28-209ENST00000522987 PATE3B3GLJ2 98 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 AKAP3O75969 853 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 RHOBTB1O94844 696 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 KLF8O95600 359 aaPredicted RBP16.4■□□□□ 0.22
MRPS28-209ENST00000522987 CAVIN2O95810 425 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 OAS1P00973 400 aaKnown RBP16.4■□□□□ 0.22
MRPS28-209ENST00000522987 TCF3P15923 654 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 ME1P48163 572 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 NOP14P78316 857 aaKnown RBP16.4■□□□□ 0.22
MRPS28-209ENST00000522987 SLC7A9P82251 487 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 EHHADHQ08426 723 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 ST3GAL2Q16842 350 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 ZNF699Q32M78 642 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 TMEM92Q6UXU6 159 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 ARMCX6Q7L4S7 300 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 FAM35AQ86V20 835 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 ADGRG2Q8IZP9 1017 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 FRMD1Q8N878 549 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 TXNDC5Q8NBS9 432 aaKnown RBP16.4■□□□□ 0.22
MRPS28-209ENST00000522987 MDGA1Q8NFP4 955 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 BACH2Q9BYV9 841 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 ELOVL4Q9GZR5 314 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 XYLT2Q9H1B5 865 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 CCSER2Q9H7U1 834 aa16.4■□□□□ 0.22
MRPS28-209ENST00000522987 SERTAD1Q9UHV2 236 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms