RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 ENPEPQ07075 957 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 DGKKQ5KSL6 1271 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 UNC93AQ86WB7 457 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 SPEM1Q8N4L4 309 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 SLC2A14Q8TDB8 520 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 ATRIPQ8WXE1 791 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 SMARCE1Q969G3 411 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 TIGD1Q96MW7 591 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 TMEM8AQ9HCN3 771 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 EHD2Q9NZN4 543 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 PCDHGA2Q9Y5H1 932 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 DMDP11532 3685 aa19.84■□□□□ 0.77
SPIDR-220ENST00000522900 PTPRDP23468 1912 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 GREB1Q4ZG55 1949 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 LEFTY2O00292 366 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 TRDMT1O14717 391 aaKnown RBP19.83■□□□□ 0.77
SPIDR-220ENST00000522900 CETN3O15182 167 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 KINO60870 393 aaKnown RBP19.83■□□□□ 0.77
SPIDR-220ENST00000522900 GADD45BO75293 160 aaPredicted RBP19.83■□□□□ 0.77
SPIDR-220ENST00000522900 SMC2O95347 1197 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 TCF3P15923 654 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 GJA4P35212 333 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 PPP3CCP48454 512 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 GALK1P51570 392 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 CCR3P51677 355 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 EML3Q32P44 896 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 COBLL1Q53SF7 1204 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 TMEM196Q5HYL7 178 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 FSTL4Q6MZW2 842 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 PKN3Q6P5Z2 889 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 SUMF1Q8NBK3 374 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 WHAMMQ8TF30 809 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 FBXO32Q969P5 355 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 SMARCD1Q96GM5 515 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 SLITRK1Q96PX8 696 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 IER2Q9BTL4 223 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 ECT2Q9H8V3 914 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 DMAP1Q9NPF5 467 aaPredicted RBP19.83■□□□□ 0.77
SPIDR-220ENST00000522900 KRT82Q9NSB4 513 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 SMPD4Q9NXE4 827 aa19.83■□□□□ 0.77
SPIDR-220ENST00000522900 CFAP54Q96N23 3096 aa19.83■□□□□ 0.76
SPIDR-220ENST00000522900 ATP8B3O60423 1300 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 TRIM49BA6NDI0 452 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 LILRB5O75023 590 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 RTN3O95197 1032 aaPredicted RBP19.82■□□□□ 0.76
SPIDR-220ENST00000522900 OLFM2O95897 454 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 OAS1P00973 400 aaKnown RBP19.82■□□□□ 0.76
SPIDR-220ENST00000522900 CD58P19256 250 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 ADORA2BP29275 332 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 IFNAR2P48551 515 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 PGFP49763 221 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 SLC5A3P53794 718 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 SLC7A9P82251 487 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 DMWDQ09019 674 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 INCA1Q0VD86 236 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 KRT39Q6A163 491 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 IMPG2Q9BZV3 1241 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 CYP3A43Q9HB55 503 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 CSNK1G1Q9HCP0 422 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 IL37Q9NZH6 218 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 CPQQ9Y646 472 aa19.82■□□□□ 0.76
SPIDR-220ENST00000522900 KIF26AQ9ULI4 1882 aaPredicted RBP19.82■□□□□ 0.76
SPIDR-220ENST00000522900 FRYLO94915 3013 aa19.81■□□□□ 0.76
SPIDR-220ENST00000522900 SCAMP3O14828 347 aaKnown RBP19.81■□□□□ 0.76
SPIDR-220ENST00000522900 EGFP01133 1207 aa19.81■□□□□ 0.76
SPIDR-220ENST00000522900 EPB41P11171 864 aaKnown RBP19.81■□□□□ 0.76
SPIDR-220ENST00000522900 CD44P16070 742 aaKnown RBP19.81■□□□□ 0.76
SPIDR-220ENST00000522900 PFKLP17858 780 aa19.81■□□□□ 0.76
SPIDR-220ENST00000522900 GTF2H1P32780 548 aa19.81■□□□□ 0.76
SPIDR-220ENST00000522900 PDE6CP51160 858 aa19.81■□□□□ 0.76
SPIDR-220ENST00000522900 MAP3K7CLP57077 242 aa19.81■□□□□ 0.76
SPIDR-220ENST00000522900 ZC3H3Q8IXZ2 948 aaKnown RBP19.81■□□□□ 0.76
SPIDR-220ENST00000522900 CPA6Q8N4T0 437 aa19.81■□□□□ 0.76
SPIDR-220ENST00000522900 DCLK2Q8N568 766 aa19.81■□□□□ 0.76
SPIDR-220ENST00000522900 ATP2A3Q93084 1043 aa19.81■□□□□ 0.76
SPIDR-220ENST00000522900 NIF3L1Q9GZT8 377 aa19.81■□□□□ 0.76
SPIDR-220ENST00000522900 K7ESF4 209 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 COCHO43405 550 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 CILPO75339 1184 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 GRSF1Q12849 480 aaKnown RBP eCLIP19.8■□□□□ 0.76
SPIDR-220ENST00000522900 CBWD6Q4V339 395 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 CBWD3Q5JTY5 395 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 CBWD5Q5RIA9 395 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 SYNPOQ8N3V7 929 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 TATDN2Q93075 761 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 HNRNPABQ99729 332 aaKnown RBP19.8■□□□□ 0.76
SPIDR-220ENST00000522900 FAM126AQ9BYI3 521 aaPredicted RBP19.8■□□□□ 0.76
SPIDR-220ENST00000522900 CCSER2Q9H7U1 834 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 RAB20Q9NX57 234 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 GMIPQ9P107 970 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 MAN1B1Q9UKM7 699 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 ANAPC1Q9H1A4 1944 aa19.8■□□□□ 0.76
SPIDR-220ENST00000522900 FAM92AA1XBS5 289 aa19.79■□□□□ 0.76
SPIDR-220ENST00000522900 HHLA1C9JL84 531 aa19.79■□□□□ 0.76
SPIDR-220ENST00000522900 MBL2P11226 248 aaPredicted RBP19.79■□□□□ 0.76
SPIDR-220ENST00000522900 BMP6P22004 513 aa19.79■□□□□ 0.76
SPIDR-220ENST00000522900 MXI1P50539 228 aa19.79■□□□□ 0.76
SPIDR-220ENST00000522900 NRLP54845 237 aa19.79■□□□□ 0.76
SPIDR-220ENST00000522900 FKBP3Q00688 224 aaKnown RBP19.79■□□□□ 0.76
SPIDR-220ENST00000522900 PPP2R5DQ14738 602 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms