RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 CDO1Q16878 200 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 VARS2Q5ST30 1063 aaKnown RBP16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 SH3PXD2AQ5TCZ1 1133 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 MFSD5Q6N075 450 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 GPRIN1Q7Z2K8 1008 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 CCDC50Q8IVM0 306 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 TMEM199Q8N511 208 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 BCL7CQ8WUZ0 217 aaPredicted RBP16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 CFAP57Q96MR6 1250 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 PNKPQ96T60 521 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 TMEM175Q9BSA9 504 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 PARD6BQ9BYG5 372 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 CYLDQ9NQC7 956 aa16.22■□□□□ 0.19
CTNNA1-236ENST00000522792 LTBP2Q14767 1821 aa16.21■□□□□ 0.19
CTNNA1-236ENST00000522792 TCRBV7S2A1N4TA0A589 114 aa16.21■□□□□ 0.19
CTNNA1-236ENST00000522792 ZNF143P52747 638 aaPredicted RBP16.21■□□□□ 0.19
CTNNA1-236ENST00000522792 RAB6CQ53S08 254 aa16.21■□□□□ 0.19
CTNNA1-236ENST00000522792 FUT10Q6P4F1 479 aa16.21■□□□□ 0.19
CTNNA1-236ENST00000522792 SIX6OS1Q8N1H7 587 aa16.21■□□□□ 0.19
CTNNA1-236ENST00000522792 HINFPQ9BQA5 517 aa16.21■□□□□ 0.19
CTNNA1-236ENST00000522792 RAB6CQ9H0N0 254 aa16.21■□□□□ 0.19
CTNNA1-236ENST00000522792 PLEKHA4Q9H4M7 779 aa16.21■□□□□ 0.19
CTNNA1-236ENST00000522792 ZWILCHQ9H900 591 aa16.21■□□□□ 0.19
CTNNA1-236ENST00000522792 SF3B1O75533 1304 aaKnown RBP eCLIP16.21■□□□□ 0.199e-6■■■■■ 68.9
CTNNA1-236ENST00000522792 PI4K2BG5E9Z4 385 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 SYN3O14994 580 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 OAZ2O95190 189 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 AMHP03971 560 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 KRT1P04264 644 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 TKTL1P51854 596 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 ATP11AP98196 1134 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 ADCY1Q08828 1119 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 SMTNL2Q2TAL5 461 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 CCDC14Q49A88 953 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 SLC39A12Q504Y0 691 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 C8orf74Q6P047 294 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 SPATA2LQ8IUW3 424 aaPredicted RBP16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 KATNAL2Q8IYT4 538 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 HDAC7Q8WUI4 952 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 KCTD13Q8WZ19 329 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 TOP1MTQ969P6 601 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 RNF25Q96BH1 459 aaPredicted RBP16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 CNPY3Q9BT09 278 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 DDX47Q9H0S4 455 aaKnown RBP16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 ASNSD1Q9NWL6 643 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 PCSK1NQ9UHG2 260 aa16.21■□□□□ 0.18
CTNNA1-236ENST00000522792 COL4A6Q14031 1691 aa16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 VWA8A3KMH1 1905 aa16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 RNF8O76064 485 aa16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 IL1R2P27930 398 aa16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 WDR5P61964 334 aaKnown RBP16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 SLC7A5Q01650 507 aa16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 SLC25A11Q02978 314 aaKnown RBP16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 SMC1AQ14683 1233 aaKnown RBP16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 MAPRE1Q15691 268 aaKnown RBP16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 KCTD19Q17RG1 926 aaPredicted RBP16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 CTXN3Q4LDR2 81 aa16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 SLC26A9Q7LBE3 791 aa16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 OTOP2Q7RTS6 562 aa16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 SLC13A5Q86YT5 568 aaPredicted RBP16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 NAP1L3Q99457 506 aaPredicted RBP16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 HERPUD2Q9BSE4 406 aa16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 ULBP1Q9BZM6 244 aa16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 CWH43Q9H720 699 aa16.2■□□□□ 0.18
CTNNA1-236ENST00000522792 HHLA1C9JL84 531 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 ZMYND10O75800 440 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 MIPP30301 263 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 SDC4P31431 198 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 MRPS5P82675 430 aaKnown RBP16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 KCNT1Q5JUK3 1230 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 SPOUT1Q5T280 376 aaKnown RBP16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 FBXO38Q6PIJ6 1188 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 TAS1R1Q7RTX1 841 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 ANKS1BQ7Z6G8 1248 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 ZDHHC14Q8IZN3 488 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 FAM149B1Q96BN6 582 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 PLVAPQ9BX97 442 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 ZCWPW1Q9H0M4 648 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 NGRNQ9NPE2 291 aaKnown RBP16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 ABI2Q9NYB9 513 aaPredicted RBP16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 NLRC5Q86WI3 1866 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 DPYSL4O14531 572 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 TFE3P19532 575 aaPredicted RBP16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 FGFR3P22607 806 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 ARPP19P56211 112 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 RBM10P98175 930 aaKnown RBP16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 HADHQ16836 314 aaKnown RBP16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 RTP2Q5QGT7 225 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 LRRC38Q5VT99 294 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 CCDC70Q6NSX1 233 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 UBE2Q1Q7Z7E8 422 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 EXD1Q8NHP7 514 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 PGLYRP2Q96PD5 576 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 HEMGNQ9BXL5 484 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 CSNK1G1Q9HCP0 422 aa16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 DMAP1Q9NPF5 467 aaPredicted RBP16.19■□□□□ 0.18
CTNNA1-236ENST00000522792 GOLGA6L10A0A0M3HER8 536 aa16.18■□□□□ 0.18
CTNNA1-236ENST00000522792 CCDC188H7C350 402 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms