RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 RARRES1P49788 294 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 RAP1GDS1P52306 607 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 VGLL4Q14135 290 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 IKBKEQ14164 716 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 CCNI2Q6ZMN8 369 aaPredicted RBP16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 C3orf67Q6ZVT6 689 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 ADGRE3Q9BY15 652 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 THAP2Q9H0W7 228 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 SRP72O76094 671 aaKnown RBP16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 CASP4P49662 377 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 ITGA8P53708 1063 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 AGBL2Q5U5Z8 902 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 RAD9BQ6WBX8 426 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 TAS1R2Q8TE23 839 aa16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 BARX2Q9UMQ3 279 aaPredicted RBP16.84■□□□□ 0.29
PCDHA3-201ENST00000522353 SGPL1O95470 568 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 CRTAMO95727 393 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 CCR1P32246 355 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 ZSWIM1Q9BR11 485 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 NMRK2Q9NPI5 230 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 NCAM2O15394 837 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 ADCY3O60266 1144 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 EPB42P16452 691 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 PGM1P36871 562 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 AGAP9Q5VTM2 703 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 FAM118BQ9BPY3 351 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 C6orf203Q9P0P8 240 aaPredicted RBP16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 SPASTQ9UBP0 616 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 AP4E1Q9UPM8 1137 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 CDY2AQ9Y6F7 541 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 CDY1Q9Y6F8 540 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 RPS6KL1Q9Y6S9 549 aa16.83■□□□□ 0.29
PCDHA3-201ENST00000522353 NWD1Q149M9 1564 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 ALOX15P16050 662 aaPredicted RBP16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 COILP38432 576 aaPredicted RBP16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 EVPLLA8MZ36 301 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 CLEC16AQ2KHT3 1053 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 SV2AQ7L0J3 742 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 USP38Q8NB14 1042 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 RFWD2Q8NHY2 731 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 CLPBQ9H078 707 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 A1CFQ9NQ94 594 aaKnown RBP16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 LNPEPQ9UIQ6 1025 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 UMODL1Q5DID0 1318 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 FAM107AO95990 144 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 PLA2G4AP47712 749 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 FKBP1BP68106 108 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 GUCY1A3Q02108 690 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 SP3Q02447 781 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 DNAL1Q4LDG9 190 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 FAM131BQ86XD5 332 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 RIOX2Q8IUF8 465 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 C4orf33Q8N1A6 199 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 XPO6Q96QU8 1125 aaKnown RBP16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 TRAF3IP3Q9Y228 551 aa16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 DRG1Q9Y295 367 aaKnown RBP16.83■□□□□ 0.28
PCDHA3-201ENST00000522353 LRRIQ1Q96JM4 1722 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 KCNJ1P48048 391 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 KLK7P49862 253 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 MCL1Q07820 350 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 CAMK2GQ13555 558 aaPredicted RBP16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 LONRF1Q17RB8 773 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 TFDP3Q5H9I0 405 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 KCNB2Q92953 911 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 TSC22D3Q99576 134 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 TINF2Q9BSI4 451 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 PDGFCQ9NRA1 345 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 CDYLQ9Y232 598 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 MYPNQ86TC9 1320 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 RTN3O95197 1032 aaPredicted RBP16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 CARSP49589 748 aaKnown RBP16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 TPCN2Q8NHX9 752 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 SKA1Q96BD8 255 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 UBE2OQ9C0C9 1292 aaKnown RBP16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 RBM12Q9NTZ6 932 aaKnown RBP16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 ANKRD65E5RJM6 399 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 DDHD2O94830 711 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 PTPN7P35236 360 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 GRK3P35626 688 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 RENBPP51606 427 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 NCKAP1LP55160 1127 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 KYNUQ16719 465 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 ERAP2Q6P179 960 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 OTULINQ96BN8 352 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 HES6Q96HZ4 224 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 PRMT1Q99873 361 aaKnown RBP16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 IL25Q9H293 177 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 ZCCHC17Q9NP64 241 aaKnown RBP16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 AURKCQ9UQB9 309 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 NFASCO94856 1347 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 ADGRA2Q96PE1 1338 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 CNTNAP2Q9UHC6 1331 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 SLC15A5A6NIM6 579 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 DYRK3O43781 588 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 ALDH18A1P54886 795 aaKnown RBP16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 CSE1LP55060 971 aaKnown RBP16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 FLOT2Q14254 428 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 NAA30Q147X3 362 aaPredicted RBP16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 CHADLQ6NUI6 762 aa16.82■□□□□ 0.28
PCDHA3-201ENST00000522353 ELOVL4Q9GZR5 314 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms