RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 SCUBE3Q8IX30 993 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 ATP11CQ8NB49 1132 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 CCDC110Q8TBZ0 833 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 RXFP2Q8WXD0 754 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 P3H4Q92791 437 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 VCPIP1Q96JH7 1222 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 MECRQ9BV79 373 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 XYLT2Q9H1B5 865 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 SIX4Q9UIU6 781 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 CPSF3Q9UKF6 684 aaKnown RBP12.71□□□□□ -0.37
DENND3-217ENST00000521835 SNX9Q9Y5X1 595 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 SNCAIPQ9Y6H5 919 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 EVPLQ92817 2033 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 PRPSAP2O60256 369 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 USP2O75604 605 aaPredicted RBP12.71□□□□□ -0.37
DENND3-217ENST00000521835 TOP3BO95985 862 aaKnown RBP12.71□□□□□ -0.37
DENND3-217ENST00000521835 PDGFRBP09619 1106 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 PEX19P40855 299 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 NDST1P52848 882 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 RAD23BP54727 409 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 MORF4L2Q15014 288 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 KBTBD12Q3ZCT8 623 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 IER5Q5VY09 327 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 LBX2Q6XYB7 198 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 HPDLQ96IR7 371 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 PEBP4Q96S96 227 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 RXFP1Q9HBX9 757 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 PCDH9Q9HC56 1237 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 CHKBQ9Y259 395 aa12.71□□□□□ -0.37
DENND3-217ENST00000521835 INSRRP14616 1297 aa12.71□□□□□ -0.38
DENND3-217ENST00000521835 OAZ1P54368 228 aa12.71□□□□□ -0.38
DENND3-217ENST00000521835 GEMIN4P57678 1058 aaKnown RBP12.71□□□□□ -0.38
DENND3-217ENST00000521835 CRADDP78560 199 aa12.71□□□□□ -0.38
DENND3-217ENST00000521835 ROR1Q01973 937 aa12.71□□□□□ -0.38
DENND3-217ENST00000521835 PTK7Q13308 1070 aa12.71□□□□□ -0.38
DENND3-217ENST00000521835 TAF1BQ53T94 588 aaPredicted RBP12.71□□□□□ -0.38
DENND3-217ENST00000521835 ANKLE1Q8NAG6 615 aa12.71□□□□□ -0.38
DENND3-217ENST00000521835 CHST13Q8NET6 341 aa12.71□□□□□ -0.38
DENND3-217ENST00000521835 RFWD2Q8NHY2 731 aa12.71□□□□□ -0.38
DENND3-217ENST00000521835 GPR20Q99678 358 aa12.71□□□□□ -0.38
DENND3-217ENST00000521835 FBXO6Q9NRD1 293 aaPredicted RBP12.71□□□□□ -0.38
DENND3-217ENST00000521835 ZNF646O15015 1829 aaPredicted RBP12.7□□□□□ -0.38
DENND3-217ENST00000521835 MGRN1O60291 552 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 LPXNO60711 386 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 ASMTLO95671 621 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 KRT7P08729 469 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 PYGBP11216 843 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 ADORA2BP29275 332 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 ZNF132P52740 706 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 SLC25A11Q02978 314 aaKnown RBP12.7□□□□□ -0.38
DENND3-217ENST00000521835 FAAP100Q0VG06 881 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 RCN2Q14257 317 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 KIZQ2M2Z5 673 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 MAP1SQ66K74 1059 aaPredicted RBP12.7□□□□□ -0.38
DENND3-217ENST00000521835 ZPBP2Q6X784 338 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 OTOAQ7RTW8 1153 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 XYLT1Q86Y38 959 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 PPIL6Q8IXY8 311 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 KIF12Q96FN5 646 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 PGLYRP2Q96PD5 576 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 ZNF395Q9H8N7 513 aaPredicted RBP12.7□□□□□ -0.38
DENND3-217ENST00000521835 IL1RAPL1Q9NZN1 696 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 SEPT10Q9P0V9 454 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 ARMCX1Q9P291 453 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 UGT1A9O60656 530 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 BGNP21810 368 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 PHBP35232 272 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 MXD4Q14582 209 aaPredicted RBP12.7□□□□□ -0.38
DENND3-217ENST00000521835 TARBP2Q15633 366 aaKnown RBP12.7□□□□□ -0.38
DENND3-217ENST00000521835 RINLQ6ZS11 566 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 SLC4A11Q8NBS3 891 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 DNERQ8NFT8 737 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 PTPRN2Q92932 1015 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 PRR11Q96HE9 360 aaPredicted RBP12.7□□□□□ -0.38
DENND3-217ENST00000521835 TTC25Q96NG3 672 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 WDR83Q9BRX9 315 aaKnown RBP12.7□□□□□ -0.38
DENND3-217ENST00000521835 NIFKQ9BYG3 293 aaKnown RBP12.7□□□□□ -0.38
DENND3-217ENST00000521835 UGT1A7Q9HAW7 530 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 UGT1A10Q9HAW8 530 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 UGT1A8Q9HAW9 530 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 CHCHD3Q9NX63 227 aaKnown RBP12.7□□□□□ -0.38
DENND3-217ENST00000521835 SLC17A6Q9P2U8 582 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 TSPAN16Q9UKR8 245 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 ZNF232Q9UNY5 417 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 LOXHD1Q8IVV2 1947 aa12.7□□□□□ -0.38
DENND3-217ENST00000521835 PPEF2O14830 753 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 NPTXRO95502 500 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 ZBED1O96006 694 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 HMGCRP04035 888 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 SETSIPP0DME0 302 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 TFE3P19532 575 aaPredicted RBP12.69□□□□□ -0.38
DENND3-217ENST00000521835 ALDH3A1P30838 453 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 SLC8A1P32418 973 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 BNIP1Q12981 228 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 FYB2Q5VWT5 728 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.69□□□□□ -0.38
DENND3-217ENST00000521835 TMEM174Q8WUU8 243 aa12.69□□□□□ -0.38
DENND3-217ENST00000521835 NDRG1Q92597 394 aaKnown RBP12.69□□□□□ -0.38
DENND3-217ENST00000521835 ZNF75CPQ92670 426 aaPredicted RBP12.69□□□□□ -0.38
DENND3-217ENST00000521835 MMP19Q99542 508 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms