RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 RTN3O95197 1032 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC9-211ENST00000521700 MRE11P49959 708 aa18.96■□□□□ 0.63
TRAPPC9-211ENST00000521700 STX17P56962 302 aa18.96■□□□□ 0.63
TRAPPC9-211ENST00000521700 WDR44Q5JSH3 913 aa18.96■□□□□ 0.63
TRAPPC9-211ENST00000521700 SCAMP5Q8TAC9 235 aa18.96■□□□□ 0.63
TRAPPC9-211ENST00000521700 CYFIP2Q96F07 1278 aa18.96■□□□□ 0.63
TRAPPC9-211ENST00000521700 HNRNPABQ99729 332 aaKnown RBP18.96■□□□□ 0.63
TRAPPC9-211ENST00000521700 CSNK1G1Q9HCP0 422 aa18.96■□□□□ 0.63
TRAPPC9-211ENST00000521700 HPS4Q9NQG7 708 aa18.96■□□□□ 0.63
TRAPPC9-211ENST00000521700 IL37Q9NZH6 218 aa18.96■□□□□ 0.63
TRAPPC9-211ENST00000521700 CTNND2Q9UQB3 1225 aa18.96■□□□□ 0.63
TRAPPC9-211ENST00000521700 BICDL2A1A5D9 508 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 SPECC1L-ADORA2AF8WAN1 911 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 ABL1P00519 1130 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 PFKLP17858 780 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 ADORA2BP29275 332 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 MAGEA9P43362 315 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 RPS9P46781 194 aaKnown RBP18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 MAP3K7CLP57077 242 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 ZNF77Q15935 545 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 ITPRIPL2Q3MIP1 535 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 TRIM68Q6AZZ1 485 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 TXNDC11Q6PKC3 985 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 RALGPS2Q86X27 583 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 MAML2Q8IZL2 1156 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 TRIML1Q8N9V2 468 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 MSANTD3Q96H12 275 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 SLITRK1Q96PX8 696 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 ARID3AQ99856 593 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 RNF38Q9H0F5 515 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 EBF3Q9H4W6 596 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 LMAN1LQ9HAT1 526 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 CISHQ9NSE2 258 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 SPATA6Q9NWH7 488 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 CHORDC1Q9UHD1 332 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 ARHGAP26Q9UNA1 814 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 MYH10P35580 1976 aa18.95■□□□□ 0.62
TRAPPC9-211ENST00000521700 OTOL1A6NHN0 477 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 TRIM21P19474 475 aaKnown RBP18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 CTHP32929 405 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 NBL1P41271 181 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 PDE6CP51160 858 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 SLC5A3P53794 718 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 ZXDBP98169 803 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 PAK1Q13153 545 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 RUNX3Q13761 415 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 MTF1Q14872 753 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 CCDC40Q4G0X9 1142 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 ZNF394Q53GI3 561 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 CC2D1AQ6P1N0 951 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 C1orf228Q6PIY5 440 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 TTC16Q8NEE8 873 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 SH3RF2Q8TEC5 729 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 FBXO32Q969P5 355 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 COMMD8Q9NX08 183 aa18.94■□□□□ 0.62
TRAPPC9-211ENST00000521700 FAM92AA1XBS5 289 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 OLFM2O95897 454 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 OAS1P00973 400 aaKnown RBP18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 FAM200BP0CF97 657 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 CHRNB1P11230 501 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 ARSAP15289 507 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 TCF3P15923 654 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 FMO5P49326 533 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 USP4Q13107 963 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 CLEC20AQ6ZU45 233 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 TTC39CQ8N584 583 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 PDZD8Q8NEN9 1154 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 OVCA2Q8WZ82 227 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 PATJQ8NI35 1801 aa18.93■□□□□ 0.62
TRAPPC9-211ENST00000521700 PROB1E7EW31 1015 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 PMM2O15305 246 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 SP9P0CG40 484 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 RAD23BP54727 409 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 SLC7A9P82251 487 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 LRMPQ12912 555 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 CUL2Q13617 745 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 PDGFRLQ15198 375 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 PPP1R26Q5T8A7 1209 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 SNX30Q5VWJ9 437 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 CLEC17AQ6ZS10 378 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 SLC4A11Q8NBS3 891 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 OSCP1Q8WVF1 389 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 TMEM176AQ96HP8 235 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 HEXIM2Q96MH2 286 aaKnown RBP18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 SRRTQ9BXP5 876 aaKnown RBP18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 DNAI2Q9GZS0 605 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 CHRDQ9H2X0 955 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 FAM124BQ9H5Z6 455 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 DUS2Q9NX74 493 aaKnown RBP18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 WNT6Q9Y6F9 365 aa18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 HELZP42694 1942 aaKnown RBP18.92■□□□□ 0.62
TRAPPC9-211ENST00000521700 HHLA1C9JL84 531 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 LEFTY2O00292 366 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 LAMTOR5O43504 91 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 ZDHHC11BP0C7U3 371 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 PGFP49763 221 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 MTAPQ13126 283 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 PON2Q15165 354 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 GPRIN1Q7Z2K8 1008 aa18.91■□□□□ 0.62
TRAPPC9-211ENST00000521700 TRIM59Q8IWR1 403 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms