RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 O00370 1275 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 MTIF2P46199 727 aaKnown RBP10.01□□□□□ -0.81
CLK4-209ENST00000521621 CACNA2D1P54289 1103 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 PDGFRLQ15198 375 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 EXOC3L4Q17RC7 722 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 TANGO2Q6ICL3 276 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 FBXL6Q8N531 539 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 STKLD1Q8NE28 680 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 MCRS1Q96EZ8 462 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 KREMEN1Q96MU8 473 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 THG1LQ9NWX6 298 aaKnown RBP10.01□□□□□ -0.81
CLK4-209ENST00000521621 COL4A3Q01955 1670 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 MYO16Q9Y6X6 1858 aa10□□□□□ -0.81
CLK4-209ENST00000521621 MAN2B1O00754 1011 aa10□□□□□ -0.81
CLK4-209ENST00000521621 LRRN2O75325 713 aa10□□□□□ -0.81
CLK4-209ENST00000521621 KIF11P52732 1056 aa10□□□□□ -0.81
CLK4-209ENST00000521621 SLC5A3P53794 718 aa10□□□□□ -0.81
CLK4-209ENST00000521621 SLC8A3P57103 927 aa10□□□□□ -0.81
CLK4-209ENST00000521621 BST2Q10589 180 aaKnown RBP10□□□□□ -0.81
CLK4-209ENST00000521621 ZNF77Q15935 545 aa10□□□□□ -0.81
CLK4-209ENST00000521621 PPP1R26Q5T8A7 1209 aaPredicted RBP10□□□□□ -0.81
CLK4-209ENST00000521621 TADA2BQ86TJ2 420 aa10□□□□□ -0.81
CLK4-209ENST00000521621 SCN4BQ8IWT1 228 aa10□□□□□ -0.81
CLK4-209ENST00000521621 ZNF687Q8N1G0 1237 aa10□□□□□ -0.81
CLK4-209ENST00000521621 OTUB2Q96DC9 234 aa10□□□□□ -0.81
CLK4-209ENST00000521621 EEF2KMTQ96G04 330 aa10□□□□□ -0.81
CLK4-209ENST00000521621 HSFY1Q96LI6 401 aa10□□□□□ -0.81
CLK4-209ENST00000521621 LRFN3Q9BTN0 628 aa10□□□□□ -0.81
CLK4-209ENST00000521621 MED10Q9BTT4 135 aa10□□□□□ -0.81
CLK4-209ENST00000521621 TRMT61BQ9BVS5 477 aaKnown RBP10□□□□□ -0.81
CLK4-209ENST00000521621 PCDHGC3Q9UN70 934 aa10□□□□□ -0.81
CLK4-209ENST00000521621 WDR3Q9UNX4 943 aaKnown RBP eCLIP10□□□□□ -0.81
CLK4-209ENST00000521621 MED7O43513 233 aa10□□□□□ -0.81
CLK4-209ENST00000521621 TPM2P07951 284 aa10□□□□□ -0.81
CLK4-209ENST00000521621 CCDC130P13994 396 aa10□□□□□ -0.81
CLK4-209ENST00000521621 CCDC142Q17RM4 750 aa10□□□□□ -0.81
CLK4-209ENST00000521621 ARHGEF19Q8IW93 802 aa10□□□□□ -0.81
CLK4-209ENST00000521621 HEXIM2Q96MH2 286 aaKnown RBP10□□□□□ -0.81
CLK4-209ENST00000521621 ARID3AQ99856 593 aa10□□□□□ -0.81
CLK4-209ENST00000521621 PLA2G2FQ9BZM2 168 aa10□□□□□ -0.81
CLK4-209ENST00000521621 LHX5Q9H2C1 402 aa10□□□□□ -0.81
CLK4-209ENST00000521621 HSD3B7Q9H2F3 369 aa10□□□□□ -0.81
CLK4-209ENST00000521621 MMRN2Q9H8L6 949 aa10□□□□□ -0.81
CLK4-209ENST00000521621 TLR8Q9NR97 1041 aaKnown RBP10□□□□□ -0.81
CLK4-209ENST00000521621 TDP1Q9NUW8 608 aa10□□□□□ -0.81
CLK4-209ENST00000521621 HEPACAM2A8MVW5 462 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 CLDN5O00501 218 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 ASGR2P07307 311 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 BPIFB4P59827 614 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 USP46P62068 366 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 C11orf57Q6ZUT1 292 aaPredicted RBP9.99□□□□□ -0.81
CLK4-209ENST00000521621 APTXQ7Z2E3 356 aaKnown RBP9.99□□□□□ -0.81
CLK4-209ENST00000521621 ARID3BQ8IVW6 561 aaPredicted RBP9.99□□□□□ -0.81
CLK4-209ENST00000521621 C12orf29Q8N999 325 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 ANKRD20A12PQ8NF67 263 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 BPIFB1Q8TDL5 484 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 SLC35F5Q8WV83 523 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 ING5Q8WYH8 240 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 USP13Q92995 863 aaPredicted RBP9.99□□□□□ -0.81
CLK4-209ENST00000521621 ERGIC2Q96RQ1 377 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 FAM83CQ9BQN1 747 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 IRF2BPLQ9H1B7 796 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 KIAA1549LQ6ZVL6 1849 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 RPS9P46781 194 aaKnown RBP9.99□□□□□ -0.81
CLK4-209ENST00000521621 KCNMA1Q12791 1236 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 MLF2Q15773 248 aaPredicted RBP9.99□□□□□ -0.81
CLK4-209ENST00000521621 ASTLQ6HA08 431 aaPredicted RBP9.99□□□□□ -0.81
CLK4-209ENST00000521621 FMNL3Q8IVF7 1028 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 FAM71AQ8IYT1 594 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 RBBP8NLQ8NC74 664 aaPredicted RBP9.99□□□□□ -0.81
CLK4-209ENST00000521621 CLDN23Q96B33 292 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 RSPRY1Q96DX4 576 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 SAMSN1Q9NSI8 373 aaKnown RBP9.99□□□□□ -0.81
CLK4-209ENST00000521621 MYO6Q9UM54 1294 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 PRUNE2Q8WUY3 3088 aa9.99□□□□□ -0.81
CLK4-209ENST00000521621 ZNF263O14978 683 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 BEST1O76090 585 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 FBXO21O94952 628 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 CD58P19256 250 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 AOC1P19801 751 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 CDH5P33151 784 aaPredicted RBP9.98□□□□□ -0.81
CLK4-209ENST00000521621 AVPR1AP37288 418 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 TAF10Q12962 218 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 KRT31Q15323 416 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 KLHDC7AQ5VTJ3 777 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 TTC30AQ86WT1 665 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 RALGPS2Q86X27 583 aaPredicted RBP9.98□□□□□ -0.81
CLK4-209ENST00000521621 PPM1KQ8N3J5 372 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 RSAD2Q8WXG1 361 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 KCNK16Q96T55 309 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 TRIM62Q9BVG3 475 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 CNGB3Q9NQW8 809 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 ARHGEF3Q9NR81 526 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 ASNSD1Q9NWL6 643 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 HESX1Q9UBX0 185 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 TSPAN16Q9UKR8 245 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 PCDHB4Q9Y5E5 795 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 E2F8A0AVK6 867 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 LGALS16A8MUM7 142 aa9.98□□□□□ -0.81
CLK4-209ENST00000521621 SLC9A3R1O14745 358 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms