RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 FAM163BP0C2L3 166 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 ENGP17813 658 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 WARSP23381 471 aaKnown RBP17.52■□□□□ 0.4
TRAM1-204ENST00000521049 HOXD12P35452 270 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 TIE1P35590 1138 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 PTGER3P43115 390 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 KIR2DL1P43626 348 aaPredicted RBP17.52■□□□□ 0.4
TRAM1-204ENST00000521049 PSMC1P62191 440 aaKnown RBP17.52■□□□□ 0.4
TRAM1-204ENST00000521049 SURF1Q15526 300 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 EMC10Q5UCC4 262 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 ERICH6BQ5W0A0 696 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 PIP4P1Q86T03 277 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 DDX42Q86XP3 938 aaKnown RBP eCLIP17.52■□□□□ 0.4
TRAM1-204ENST00000521049 GPD1LQ8N335 351 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 MYCBPAPQ8TBZ2 947 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 KCNV2Q8TDN2 545 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 FAM84AQ96KN4 292 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 PCIF1Q9H4Z3 704 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 TBC1D14Q9P2M4 693 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 MBD1Q9UIS9 605 aaPredicted RBP17.52■□□□□ 0.4
TRAM1-204ENST00000521049 PILRBQ9UKJ0 227 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 MSRB2Q9Y3D2 182 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 CPQQ9Y646 472 aa17.52■□□□□ 0.4
TRAM1-204ENST00000521049 ZNF638Q14966 1978 aaKnown RBP17.51■□□□□ 0.39
TRAM1-204ENST00000521049 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.51■□□□□ 0.39
TRAM1-204ENST00000521049 ADH1CP00326 375 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 OAS1P00973 400 aaKnown RBP17.51■□□□□ 0.39
TRAM1-204ENST00000521049 TNNC2P02585 160 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 PDGFRBP09619 1106 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 CASP5P51878 434 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 CYP27A1Q02318 531 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 MESP2Q0VG99 397 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 RESTQ13127 1097 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 SEMA3BQ13214 749 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 DUOXA2Q1HG44 320 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 PEAR1Q5VY43 1037 aaPredicted RBP17.51■□□□□ 0.39
TRAM1-204ENST00000521049 TDRD10Q5VZ19 366 aaKnown RBP17.51■□□□□ 0.39
TRAM1-204ENST00000521049 RRAGBQ5VZM2 374 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 SFTPA1Q8IWL2 248 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 FRMD1Q8N878 549 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 OR5B17Q8NGF7 314 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 CEP76Q8TAP6 659 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 PCED1BQ96HM7 432 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 ARHGEF4Q9NR80 690 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 BCCIPQ9P287 314 aaKnown RBP eCLIP17.51■□□□□ 0.39
TRAM1-204ENST00000521049 CIZ1Q9ULV3 898 aaPredicted RBP17.51■□□□□ 0.39
TRAM1-204ENST00000521049 SMC3Q9UQE7 1217 aa17.51■□□□□ 0.39
TRAM1-204ENST00000521049 OBSL1O75147 1896 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 FRMD3A2A2Y4 597 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 ZNF233A6NK53 670 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 ADAM23O75077 832 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 RDXP35241 583 aaKnown RBP17.5■□□□□ 0.39
TRAM1-204ENST00000521049 GNL1P36915 607 aaPredicted RBP17.5■□□□□ 0.39
TRAM1-204ENST00000521049 MAPK8P45983 427 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 TAF10Q12962 218 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 LYSMD4Q5XG99 296 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 LRSAM1Q6UWE0 723 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 ARMCX6Q7L4S7 300 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 HMGB4Q8WW32 186 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 ZCCHC14Q8WYQ9 949 aaKnown RBP17.5■□□□□ 0.39
TRAM1-204ENST00000521049 OTUB2Q96DC9 234 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 SMPD4Q9NXE4 827 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 CFAP97Q9P2B7 532 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 SLC6A14Q9UN76 642 aa17.5■□□□□ 0.39
TRAM1-204ENST00000521049 TCHHQ07283 1943 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 E2F8A0AVK6 867 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 FAM221BA6H8Z2 402 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 F8VP50 259 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 H0Y626 953 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 AP5Z1O43299 807 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 HYAL3O43820 417 aaPredicted RBP17.49■□□□□ 0.39
TRAM1-204ENST00000521049 TRIM16O95361 564 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 ABL1P00519 1130 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 ADH5P11766 374 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 HOXB3P14651 431 aaPredicted RBP17.49■□□□□ 0.39
TRAM1-204ENST00000521049 IDEP14735 1019 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 SIM1P81133 766 aaPredicted RBP17.49■□□□□ 0.39
TRAM1-204ENST00000521049 GAD2Q05329 585 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 DUOXA1Q1HG43 343 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 PREPLQ4J6C6 727 aaPredicted RBP17.49■□□□□ 0.39
TRAM1-204ENST00000521049 C12orf40Q86WS4 652 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 PGBD3Q8N328 593 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 PHTF2Q8N3S3 785 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 NOC3LQ8WTT2 800 aaKnown RBP17.49■□□□□ 0.39
TRAM1-204ENST00000521049 SLITRK1Q96PX8 696 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 MMS19Q96T76 1030 aa17.49■□□□□ 0.39
TRAM1-204ENST00000521049 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.49■□□□□ 0.39
TRAM1-204ENST00000521049 SRPRBQ9Y5M8 271 aaKnown RBP17.49■□□□□ 0.39
TRAM1-204ENST00000521049 ZZEF1O43149 2961 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 TCRBV21S2A2A0A5A6 115 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 TBC1D3BA6NDS4 549 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 TACC1O75410 805 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 MBL2P11226 248 aaPredicted RBP17.48■□□□□ 0.39
TRAM1-204ENST00000521049 ITPKAP23677 461 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 TXLNAP40222 546 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 ATXN3P54252 364 aaPredicted RBP17.48■□□□□ 0.39
TRAM1-204ENST00000521049 GFPT1Q06210 699 aaPredicted RBP17.48■□□□□ 0.39
TRAM1-204ENST00000521049 KIAA1211LQ6NV74 962 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 SLC36A4Q6YBV0 504 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 NUDT18Q6ZVK8 323 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms