RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 CNGB3Q9NQW8 809 aa6.72□□□□□ -1.33
IGHV4-55-201ENST00000520889 FAM49BQ9NUQ9 324 aa6.72□□□□□ -1.33
IGHV4-55-201ENST00000520889 ASNSD1Q9NWL6 643 aa6.72□□□□□ -1.33
IGHV4-55-201ENST00000520889 CLDND1Q9NY35 253 aa6.72□□□□□ -1.33
IGHV4-55-201ENST00000520889 WDR35Q9P2L0 1181 aa6.72□□□□□ -1.33
IGHV4-55-201ENST00000520889 CD207Q9UJ71 328 aa6.72□□□□□ -1.33
IGHV4-55-201ENST00000520889 FAM50BQ9Y247 325 aa6.72□□□□□ -1.33
IGHV4-55-201ENST00000520889 ZFP37Q9Y6Q3 630 aaPredicted RBP6.72□□□□□ -1.33
IGHV4-55-201ENST00000520889 LAMA3Q16787 3333 aa6.72□□□□□ -1.33
IGHV4-55-201ENST00000520889 DOCK8Q8NF50 2099 aa6.72□□□□□ -1.33
IGHV4-55-201ENST00000520889 SLC38A8A6NNN8 435 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 M0QYV0 167 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 ABCB7O75027 752 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 TBX10O75333 385 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 GLI1P08151 1106 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 ZDHHC11BP0C7U3 371 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 HMGA1P17096 107 aaKnown RBP6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 CHRNB2P17787 502 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 TNFAIP3P21580 790 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 YWHAQP27348 245 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 GTF2F1P35269 517 aaKnown RBP eCLIP6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 TUBP50607 506 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 MAP3K7CLP57077 242 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 NOMO3P69849 1222 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 FMO1Q01740 532 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 ORC1Q13415 861 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 SMAD4Q13485 552 aaKnown RBP6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 AAK1Q2M2I8 961 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 C10orf76Q5T2E6 689 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 CYP4A22Q5TCH4 519 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 KLHDC10Q6PID8 442 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 WDR59Q6PJI9 974 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 CCDC186Q7Z3E2 898 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 DNAJB7Q7Z6W7 309 aaPredicted RBP6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 MON1AQ86VX9 555 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 TMTC1Q8IUR5 882 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 CCDC170Q8IYT3 715 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 SMRP1Q8NCR6 262 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 C1orf131Q8NDD1 294 aaKnown RBP6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 IPO4Q8TEX9 1081 aaKnown RBP6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 CPLX3Q8WVH0 158 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 SUSD6Q92537 303 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 SMG7Q92540 1137 aaKnown RBP6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 SECISBP2LQ93073 1101 aaKnown RBP6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 TRIM11Q96F44 468 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 PDLIM2Q96JY6 352 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 SLITRK1Q96PX8 696 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 CDK5RAP1Q96SZ6 601 aaKnown RBP6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 KCNK16Q96T55 309 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 PDCL3Q9H2J4 239 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 IGFLR1Q9H665 355 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 UBE2ZQ9H832 354 aaPredicted RBP6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 LRRC4Q9HBW1 653 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 WDR6Q9NNW5 1121 aaKnown RBP6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 ASAH2Q9NR71 780 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 CLIC5Q9NZA1 410 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 STRIP2Q9ULQ0 834 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 SCML2Q9UQR0 700 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 USTQ9Y2C2 406 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 SLC27A5Q9Y2P5 690 aa6.71□□□□□ -1.34
IGHV4-55-201ENST00000520889 SPDYE4A6NLX3 237 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 CLDN5O00501 218 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 LINC01565O15544 149 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 RTN2O75298 545 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 RFPL2O75678 378 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 BEST1O76090 585 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 LCA5LO95447 670 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 OLFM2O95897 454 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 F11P03951 625 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 CALB1P05937 261 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 MMEP08473 750 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 SPATA31D3P0C874 917 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 PNMA6AP0CW24 399 aaPredicted RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 MYBL1P10243 752 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 TCF3P15923 654 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 MMP8P22894 467 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 NSFP46459 744 aaKnown RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 SLC5A3P53794 718 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 CACNA2D1P54289 1103 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 ADKP55263 362 aaKnown RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 MRPS5P82675 430 aaKnown RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 PDCLQ13371 301 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 ZNF268Q14587 947 aaPredicted RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 TAF12Q16514 161 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 SLC18A3Q16572 532 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 PTPN21Q16825 1174 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 DDR2Q16832 855 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 CCDC142Q17RM4 750 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 CLEC16AQ2KHT3 1053 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 ASTE1Q2TB18 679 aaPredicted RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 EFHC1Q5JVL4 640 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 PRSS36Q5K4E3 855 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 E4F1Q66K89 784 aaPredicted RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 ACAD10Q6JQN1 1059 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 PMF1Q6P1K2 205 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 LLGL2Q6P1M3 1020 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 SPATA31D4Q6ZUB0 917 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 ZNF571Q7Z3V5 609 aaPredicted RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 TADA2BQ86TJ2 420 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 ERICH1Q86X53 443 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms