RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 C16orf70Q9BSU1 422 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 EDEM3Q9BZQ6 932 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 ZDHHC9Q9Y397 364 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 SAR1BQ9Y6B6 198 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 MYH14Q7Z406 1995 aaKnown RBP12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 COL22A1Q8NFW1 1626 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 E5RI56 91 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 PPP1R12AO14974 1030 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 P4HA2O15460 535 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 SCNN1BP51168 640 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 LMNB2Q03252 620 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 GRSF1Q12849 480 aaKnown RBP eCLIP12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 C9orf57Q5W0N0 161 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 CCDC62Q6P9F0 684 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 PIK3R5Q8WYR1 880 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 ATP2A3Q93084 1043 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 EPC1Q9H2F5 836 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 NFATC1O95644 943 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 MAPK9P45984 424 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 CYP4F8P98187 520 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 ZNF211Q13398 564 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 C12orf50Q8NA57 414 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 NUDCD1Q96RS6 583 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 ARHGEF4Q9NR80 690 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 GPATCH2LQ9NWQ4 482 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 LIMD1Q9UGP4 676 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 TTC7AQ9ULT0 858 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 PCDHA13Q9Y5I0 950 aa12.34□□□□□ -0.43
PCDHGB6-201ENST00000520790 ARHGAP42A6NI28 874 aa12.33□□□□□ -0.43
PCDHGB6-201ENST00000520790 INPPL1O15357 1258 aa12.33□□□□□ -0.43
PCDHGB6-201ENST00000520790 CTSEP14091 401 aa12.33□□□□□ -0.43
PCDHGB6-201ENST00000520790 SF3A3Q12874 501 aaKnown RBP eCLIP12.33□□□□□ -0.43
PCDHGB6-201ENST00000520790 GLIS3Q8NEA6 775 aa12.33□□□□□ -0.43
PCDHGB6-201ENST00000520790 CDC26Q8NHZ8 85 aa12.33□□□□□ -0.43
PCDHGB6-201ENST00000520790 SERPINB11Q96P15 392 aa12.33□□□□□ -0.43
PCDHGB6-201ENST00000520790 NSUN3Q9H649 340 aaKnown RBP12.33□□□□□ -0.43
PCDHGB6-201ENST00000520790 DUS2Q9NX74 493 aaKnown RBP12.33□□□□□ -0.43
PCDHGB6-201ENST00000520790 SOWAHDA6NJG2 315 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 LTFP02788 710 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 ITPRIPL1Q6GPH6 555 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 PIGZQ86VD9 579 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 TOX2Q96NM4 488 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 MAGEB5Q9BZ81 275 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 IKZF4Q9H2S9 585 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 OGFRQ9NZT2 677 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 NR2E1Q9Y466 385 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 A8MX80 341 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 FAM155AB1AL88 458 aaPredicted RBP12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 PMPCBO75439 489 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 LYPLA2O95372 231 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 MBTD1Q05BQ5 628 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 SEMA3FQ13275 785 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 TRIM65Q6PJ69 517 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 CEP128Q6ZU80 1094 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 DDX42Q86XP3 938 aaKnown RBP eCLIP12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 C12orf29Q8N999 325 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 MYRIPQ8NFW9 859 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 ZNF507Q8TCN5 953 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 XPNPEP1Q9NQW7 623 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 AFDNP55196 1824 aaKnown RBP12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 EIF4E1BA6NMX2 242 aaKnown RBP12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 TAP1Q03518 808 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 RHOT1Q8IXI2 618 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 HACD3Q9P035 362 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 USP18Q9UMW8 372 aa12.33□□□□□ -0.44
PCDHGB6-201ENST00000520790 PDZK1P1A8MUH7 402 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 APOL1O14791 398 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 NCK2O43639 380 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 DHPSP49366 369 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 GTF2BQ00403 316 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 MAP3K10Q02779 954 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 NUGGCQ68CJ6 796 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 MINDY3Q9H8M7 445 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBC1D3DA0A087WVF3 549 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBC1D3IA0A087WXS9 549 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBC1D3EA0A087X179 549 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBC1D3KA0A087X1G2 549 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBC1D3FA6NER0 549 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBC1D3LB9A6J9 549 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 PALMO75781 387 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBC1D3HP0C7X1 549 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 CSE1LP55060 971 aaKnown RBP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBC1D3GQ6DHY5 549 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBC1D3CQ6IPX1 549 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 TBC1D3Q8IZP1 549 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 DEFB106AQ8N104 65 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 KLC2Q9H0B6 622 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 PDLIM7Q9NR12 457 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 GMEB2Q9UKD1 530 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 LRRIQ3A6PVS8 624 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 WNT7AO00755 349 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 MDM4O15151 490 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 NDUFA10O95299 355 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 DNTTP04053 509 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 SERPIND1P05546 499 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 CFHP08603 1231 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 NPR3P17342 541 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 DAB2P98082 770 aa12.32□□□□□ -0.44
PCDHGB6-201ENST00000520790 ZBTB16Q05516 673 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms