RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 GON4LQ3T8J9 2241 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 SPTA1P02549 2419 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 ATXN2Q99700 1313 aaKnown RBP5.29□□□□□ -1.56
SDCBP-207ENST00000520168 STK36Q9NRP7 1315 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 MYLKQ15746 1914 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 TMEM131Q92545 1883 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 HMGB1P1B2RPK0 211 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-207ENST00000520168 FLRT2O43155 660 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 CCNT1O60563 726 aaKnown RBP5.29□□□□□ -1.56
SDCBP-207ENST00000520168 CBFA2T3O75081 653 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 DKK1O94907 266 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 DEXIO95424 95 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 VNN2O95498 520 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 CER1O95813 267 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 F11P03951 625 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 MCF2P10911 925 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 CDK4P11802 303 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 ODC1P11926 461 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 HLA-EP13747 358 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 ARSAP15289 507 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 XBP1P17861 261 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 IGFBP6P24592 240 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-207ENST00000520168 ABL2P42684 1182 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 AARSP49588 968 aaKnown RBP eCLIP5.29□□□□□ -1.56
SDCBP-207ENST00000520168 CYP4F8P98187 520 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 CFHR1Q03591 330 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 ZNF33AQ06730 810 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 CYP4F3Q08477 520 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 EML3Q32P44 896 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 MAP7D1Q3KQU3 841 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 PLEKHG6Q3KR16 790 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 ZNF568Q3ZCX4 644 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 WDR45BQ5MNZ6 344 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 SYCP2LQ5T4T6 812 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 EEF1DP3Q658K8 133 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 OVOS1Q6IE37 1185 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 ARMCX6Q7L4S7 300 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 MON1AQ86VX9 555 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 MAB21L3Q8N8X9 362 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 PIP4K2CQ8TBX8 421 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 HAS1Q92839 578 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 KIFAP3Q92845 792 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 USP13Q92995 863 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-207ENST00000520168 NXPE2Q96DL1 559 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 DRC1Q96MC2 740 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 FCRL3Q96P31 734 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-207ENST00000520168 TSPAN18Q96SJ8 248 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 NUCKS1Q9H1E3 243 aaKnown RBP5.29□□□□□ -1.56
SDCBP-207ENST00000520168 FBRSL1Q9HCM7 1045 aaKnown RBP5.29□□□□□ -1.56
SDCBP-207ENST00000520168 TIMMDC1Q9NPL8 285 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 ANO2Q9NQ90 1003 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 POLR3BQ9NW08 1133 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-207ENST00000520168 PCOLCE2Q9UKZ9 415 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 DSEQ9UL01 958 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 PCDHA12Q9UN75 941 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 CCL26Q9Y258 94 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 PCDHGB2Q9Y5G2 931 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 PTPN13Q12923 2485 aa5.29□□□□□ -1.56
SDCBP-207ENST00000520168 TEX15Q9BXT5 2789 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 GOLGA4Q13439 2230 aaKnown RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 ASXL3Q9C0F0 2248 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 PTPRQQ9UMZ3 2332 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 TRABD2BA6NFA1 517 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 MYMKA6NI61 221 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 K7EQS6 105 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 K7ERI5 159 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 LARGE1O95461 756 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 APODP05090 189 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 USP17L7P0C7H9 530 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 CSH1P0DML2 217 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 CSH2P0DML3 217 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 PFKLP17858 780 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 LIG1P18858 919 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 CYP3A5P20815 502 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 MUTP22033 750 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 LRPAP1P30533 357 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 HSPA4P34932 840 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 HNF1BP35680 557 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 EIF2S3P41091 472 aaKnown RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 SEC13P55735 322 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 NLRP12P59046 1061 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 MCCD1P59942 119 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 SSRP1Q08945 709 aaKnown RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 SCRN1Q12765 414 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 USP4Q13107 963 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 SMAD1Q15797 465 aaKnown RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 ZNF77Q15935 545 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 MGAT5BQ3V5L5 792 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 C2orf27AQ580R0 203 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 CPLX2Q6PUV4 134 aaKnown RBP5.28□□□□□ -1.56
SDCBP-207ENST00000520168 DSTYKQ6XUX3 929 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 Q6ZUG5 572 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 TAS1R3Q7RTX0 852 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 GPR155Q7Z3F1 870 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 TTC30AQ86WT1 665 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 PGBD3Q8N328 593 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 PNPLA1Q8N8W4 532 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 FSIP1Q8NA03 581 aa5.28□□□□□ -1.56
SDCBP-207ENST00000520168 IL17RCQ8NAC3 791 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms