RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 TLE1Q04724 770 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 TCF15Q12870 199 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 HABP2Q14520 560 aaPredicted RBP2.36□□□□□ -2.03
CCNC-208ENST00000519617 CC2D1BQ5T0F9 858 aaKnown RBP2.36□□□□□ -2.03
CCNC-208ENST00000519617 RBM20Q5T481 1227 aaKnown RBP2.36□□□□□ -2.03
CCNC-208ENST00000519617 ZNF772Q68DY9 489 aaPredicted RBP2.36□□□□□ -2.03
CCNC-208ENST00000519617 TAF2Q6P1X5 1199 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 MIGA2Q7L4E1 593 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 CHSY1Q86X52 802 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 AFAP1L2Q8N4X5 818 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 PPM1NQ8N819 430 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 ADAMTS15Q8TE58 950 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 PIGOQ8TEQ8 1089 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 HDAC10Q969S8 669 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 FAM136AQ96C01 138 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 MARK4Q96L34 752 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 C5orf34Q96MH7 638 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 ASB2Q96Q27 587 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 CAMKK2Q96RR4 588 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 DMRTA2Q96SC8 542 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 SMOC2Q9H3U7 446 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 PRDM11Q9NQV5 511 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 RLIMQ9NVW2 624 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 SIDT1Q9NXL6 827 aaKnown RBP2.36□□□□□ -2.03
CCNC-208ENST00000519617 WWOXQ9NZC7 414 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.36□□□□□ -2.03
CCNC-208ENST00000519617 FLT4P35916 1363 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 PLEKHG2Q9H7P9 1386 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 LTBP4Q8N2S1 1624 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 USP32Q8NFA0 1604 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 BLMP54132 1417 aaPredicted RBP2.35□□□□□ -2.03
CCNC-208ENST00000519617 NALCNQ8IZF0 1738 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 TRIM75PA6NK02 468 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 E5RJQ4 531 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 QSOX1O00391 747 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 CHEK2O96017 543 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 CENPBP07199 599 aaPredicted RBP2.35□□□□□ -2.03
CCNC-208ENST00000519617 HSP90AB1P08238 724 aaKnown RBP2.35□□□□□ -2.03
CCNC-208ENST00000519617 ITGALP20701 1170 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 CD6P30203 668 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 CYP2C18P33260 490 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 ARHGAP25P42331 645 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 TMPRSS15P98073 1019 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 AMOTQ4VCS5 1084 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 PCID2Q5JVF3 399 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 C1orf141Q5JVX7 400 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 VPS53Q5VIR6 699 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 DLK2Q6UY11 383 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 GADL1Q6ZQY3 521 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 MEPCEQ7L2J0 689 aaKnown RBP2.35□□□□□ -2.03
CCNC-208ENST00000519617 IRF2BP2Q7Z5L9 587 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 MRPL10Q7Z7H8 261 aaKnown RBP2.35□□□□□ -2.03
CCNC-208ENST00000519617 NPM2Q86SE8 214 aaKnown RBP2.35□□□□□ -2.03
CCNC-208ENST00000519617 NANOGP1Q8N7R0 232 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 PSD4Q8NDX1 1056 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 NSMCE1Q8WV22 266 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 RAPGEF4Q8WZA2 1011 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 IP6K1Q92551 441 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 VCPIP1Q96JH7 1222 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 ZC3H10Q96K80 434 aaKnown RBP2.35□□□□□ -2.03
CCNC-208ENST00000519617 CLPTM1LQ96KA5 538 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 NELL2Q99435 816 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 PRKRIP1Q9H875 184 aaPredicted RBP2.35□□□□□ -2.03
CCNC-208ENST00000519617 GPR35Q9HC97 309 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 SERHLQ9NQF3 203 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 SH2B3Q9UQQ2 575 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 THRAP3Q9Y2W1 955 aaKnown RBP2.35□□□□□ -2.03
CCNC-208ENST00000519617 IPPQ9Y573 584 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 ABCC6O95255 1503 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 WDR17Q8IZU2 1322 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 CPDO75976 1380 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 INSRP06213 1382 aa2.35□□□□□ -2.03
CCNC-208ENST00000519617 AHDC1Q5TGY3 1603 aaPredicted RBP2.35□□□□□ -2.03
CCNC-208ENST00000519617 FAM90A10PA6NDY2 464 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 PRSS29PA6NIE9 313 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 F2RL2O00254 374 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 PPM1DO15297 605 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 SLC16A3O15427 465 aaKnown RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 GPR39O43194 453 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 HTRA2O43464 458 aaPredicted RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 TLR5O60602 858 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 FGBP02675 491 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 PDHA1P08559 390 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 U2AF1L5P0DN76 240 aaPredicted RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 EDNRBP24530 442 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 PPP2R1AP30153 589 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 CYP2C19P33261 490 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 TNNT2P45379 298 aaPredicted RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 MTHFSP49914 203 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 TOB1P50616 345 aaPredicted RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 CYP4F2P78329 520 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 HTRA4P83105 476 aaPredicted RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 U2AF1Q01081 240 aaKnown RBP eCLIP2.34□□□□□ -2.03
CCNC-208ENST00000519617 LRRC41Q15345 812 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 Q4G0T1 1027 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 PLEKHO1Q53GL0 409 aaPredicted RBP2.34□□□□□ -2.03
CCNC-208ENST00000519617 CCDC93Q567U6 631 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 TAF7LQ5H9L4 462 aa2.34□□□□□ -2.03
CCNC-208ENST00000519617 PPP4R3AQ6IN85 833 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms