RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PON2Q15165 354 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 ZNF77Q15935 545 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 ITPRIPL2Q3MIP1 535 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 ZNF528Q3MIS6 628 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 FILIP1Q7Z7B0 1213 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 FAM35AQ86V20 835 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 ADGRG2Q8IZP9 1017 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 SH3RF2Q8TEC5 729 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 NELL1Q92832 810 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 CYFIP2Q96F07 1278 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 HNRNPABQ99729 332 aaKnown RBP9.92□□□□□ -0.82
HDAC3-215ENST00000519474 DUSP9Q99956 384 aaKnown RBP9.92□□□□□ -0.82
HDAC3-215ENST00000519474 MED10Q9BTT4 135 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 GTPBP4Q9BZE4 634 aaKnown RBP9.92□□□□□ -0.82
HDAC3-215ENST00000519474 CHRDQ9H2X0 955 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 EBF3Q9H4W6 596 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 KIF9Q9HAQ2 790 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 CSNK1G1Q9HCP0 422 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 RBM12Q9NTZ6 932 aaKnown RBP9.92□□□□□ -0.82
HDAC3-215ENST00000519474 COMMD8Q9NX08 183 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 RAB20Q9NX57 234 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 HOOK1Q9UJC3 728 aaKnown RBP9.92□□□□□ -0.82
HDAC3-215ENST00000519474 FBXO4Q9UKT5 387 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 COQ4Q9Y3A0 265 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 F5P12259 2224 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 ANAPC1Q9H1A4 1944 aa9.92□□□□□ -0.82
HDAC3-215ENST00000519474 FAM92AA1XBS5 289 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 PRR23AA6NEV1 266 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 HHLA1C9JL84 531 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 TRDMT1O14717 391 aaKnown RBP9.91□□□□□ -0.82
HDAC3-215ENST00000519474 CILPO75339 1184 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 AP1G2O75843 785 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 RTN3O95197 1032 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-215ENST00000519474 ABL1P00519 1130 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 ZDHHC11BP0C7U3 371 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 EPB41P11171 864 aaKnown RBP9.91□□□□□ -0.82
HDAC3-215ENST00000519474 MAP3K7CLP57077 242 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 MORC3Q14149 939 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 CBWD6Q4V339 395 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 CBWD3Q5JTY5 395 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 CBWD5Q5RIA9 395 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 SNX30Q5VWJ9 437 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 TTI2Q6NXR4 508 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 TSSK4Q6SA08 328 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 FBXL13Q8NEE6 735 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 SLC2A14Q8TDB8 520 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 OSCP1Q8WVF1 389 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 NKD2Q969F2 451 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-215ENST00000519474 TRIM44Q96DX7 344 aaPredicted RBP9.91□□□□□ -0.82
HDAC3-215ENST00000519474 MSANTD3Q96H12 275 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 FAXDC2Q96IV6 333 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 TSG101Q99816 390 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 NT5C1AQ9BXI3 368 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 SEMA4AQ9H3S1 761 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 DUS2Q9NX74 493 aaKnown RBP9.91□□□□□ -0.82
HDAC3-215ENST00000519474 EHD2Q9NZN4 543 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 CHMP5Q9NZZ3 219 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 PRDM4Q9UKN5 801 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 ARHGAP26Q9UNA1 814 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 TICRRQ7Z2Z1 1910 aa9.91□□□□□ -0.82
HDAC3-215ENST00000519474 COL4A2P08572 1712 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 PTPRDP23468 1912 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 LEFTY2O00292 366 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 BIN1O00499 593 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 STX10O60499 249 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 KINO60870 393 aaKnown RBP9.9□□□□□ -0.82
HDAC3-215ENST00000519474 OLFM2O95897 454 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 OAS1P00973 400 aaKnown RBP9.9□□□□□ -0.82
HDAC3-215ENST00000519474 CKMP06732 381 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 TDGF1P13385 188 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 ADORA2BP29275 332 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 HOXC13P31276 330 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 GJA4P35212 333 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 CXCL12P48061 93 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 RAD23BP54727 409 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 SLC7A9P82251 487 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 LRRC63Q05C16 580 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 IFRD2Q12894 506 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-215ENST00000519474 CCINQ13939 588 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 MTF1Q14872 753 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 PDGFRLQ15198 375 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 EML3Q32P44 896 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 TMEM196Q5HYL7 178 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 DGKKQ5KSL6 1271 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 PPP1R26Q5T8A7 1209 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-215ENST00000519474 NAIF1Q69YI7 327 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-215ENST00000519474 CC2D1AQ6P1N0 951 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-215ENST00000519474 C1orf228Q6PIY5 440 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 SUMF1Q8NBK3 374 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 ZBTB44Q8NCP5 570 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 OVCA2Q8WZ82 227 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 SLC35C1Q96A29 364 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 SMARCD1Q96GM5 515 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 HEXIM2Q96MH2 286 aaKnown RBP9.9□□□□□ -0.82
HDAC3-215ENST00000519474 IMPG2Q9BZV3 1241 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 ECT2Q9H8V3 914 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 DMAP1Q9NPF5 467 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-215ENST00000519474 FAM49BQ9NUQ9 324 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 C2orf42Q9NWW7 574 aa9.9□□□□□ -0.82
HDAC3-215ENST00000519474 WNT6Q9Y6F9 365 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms