RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ZNF558Q96NG5 402 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 SLC9A7Q96T83 725 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 USTQ9Y2C2 406 aa15.24■□□□□ 0.03
CLN8-204ENST00000519254 GOLGA6L10A0A0M3HER8 536 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 F8VP50 259 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 GOLGA8SH3BPF8 625 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 FSCN2O14926 492 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 PTPN1P18031 435 aaKnown RBP15.23■□□□□ 0.03
CLN8-204ENST00000519254 PCSK1P29120 753 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 RFC1P35251 1148 aaPredicted RBP15.23■□□□□ 0.03
CLN8-204ENST00000519254 STILQ15468 1287 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 PPP2R5EQ16537 467 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 PKDCCQ504Y2 493 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 RHOT1Q8IXI2 618 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 CRYBG2Q8N1P7 616 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 THEM5Q8N1Q8 247 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 CCDC26Q8TAB7 109 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 SLC2A14Q8TDB8 520 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 RTP3Q9BQQ7 232 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 CRTAC1Q9NQ79 661 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 WDR35Q9P2L0 1181 aa15.23■□□□□ 0.03
CLN8-204ENST00000519254 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.23■□□□□ 0.03
CLN8-204ENST00000519254 TTI1O43156 1089 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 TLL1O43897 1013 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 RARAP10276 462 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 KRT3P12035 628 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 TCF4P15884 667 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 LAG3P18627 525 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 C9orf50Q5SZB4 431 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 MAATS1Q7Z4T9 603 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 KATNAL2Q8IYT4 538 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 FIBCD1Q8N539 461 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 NIPA2Q8N8Q9 360 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 COLGALT1Q8NBJ5 622 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 OR10T2Q8NGX3 314 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 JOSD2Q8TAC2 188 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 MCRS1Q96EZ8 462 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 IGSF21Q96ID5 467 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 GDAP1L1Q96MZ0 367 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 TMEM209Q96SK2 561 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 HERPUD2Q9BSE4 406 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 MED10Q9BTT4 135 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 PLVAPQ9BX97 442 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 LCMT1Q9UIC8 334 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 CDH9Q9ULB4 789 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 INSL6Q9Y581 213 aa15.22■□□□□ 0.03
CLN8-204ENST00000519254 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 CLDN5O00501 218 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 SYN3O14994 580 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 PHF2O75151 1096 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 HTRA4P83105 476 aaPredicted RBP15.21■□□□□ 0.03
CLN8-204ENST00000519254 ELAVL2Q12926 359 aaKnown RBP15.21■□□□□ 0.03
CLN8-204ENST00000519254 PIGHQ14442 188 aaPredicted RBP15.21■□□□□ 0.03
CLN8-204ENST00000519254 LLGL1Q15334 1064 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 CYP1B1Q16678 543 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 KCTD19Q17RG1 926 aaPredicted RBP15.21■□□□□ 0.03
CLN8-204ENST00000519254 VARS2Q5ST30 1063 aaKnown RBP15.21■□□□□ 0.03
CLN8-204ENST00000519254 TAS1R1Q7RTX1 841 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 TTC30AQ86WT1 665 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 KRT222Q8N1A0 295 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 IFT81Q8WYA0 676 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 ACBD6Q9BR61 282 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 UBXN6Q9BZV1 441 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 SYNCQ9H7C4 482 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLN8-204ENST00000519254 HESX1Q9UBX0 185 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 NFU1Q9UMS0 254 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 KIAA1671Q9BY89 1806 aa15.21■□□□□ 0.03
CLN8-204ENST00000519254 OR4Q2P0C623 313 aa15.21■□□□□ 0.02
CLN8-204ENST00000519254 TNNT3P45378 269 aaPredicted RBP15.21■□□□□ 0.02
CLN8-204ENST00000519254 ATP13A4Q4VNC1 1196 aa15.21■□□□□ 0.02
CLN8-204ENST00000519254 INTS6LQ5JSJ4 861 aaKnown RBP15.21■□□□□ 0.02
CLN8-204ENST00000519254 ARHGAP17Q68EM7 881 aa15.21■□□□□ 0.02
CLN8-204ENST00000519254 TTC27Q6P3X3 843 aa15.21■□□□□ 0.02
CLN8-204ENST00000519254 SLC39A11Q8N1S5 342 aa15.21■□□□□ 0.02
CLN8-204ENST00000519254 SPATA18Q8TC71 538 aa15.21■□□□□ 0.02
CLN8-204ENST00000519254 SEC14L1Q92503 715 aa15.21■□□□□ 0.02
CLN8-204ENST00000519254 TMEM169Q96HH4 297 aa15.21■□□□□ 0.02
CLN8-204ENST00000519254 RAD9AQ99638 391 aa15.21■□□□□ 0.02
CLN8-204ENST00000519254 VWA8A3KMH1 1905 aa15.21■□□□□ 0.02
CLN8-204ENST00000519254 LCHNA4D1U4 455 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 TULP2O00295 520 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 GABBR2O75899 941 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 FGFR3P22607 806 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 CHRNA3P32297 505 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 PTGIRP43119 386 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 SSR1P43307 286 aaKnown RBP15.2■□□□□ 0.02
CLN8-204ENST00000519254 RABGGTBP53611 331 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 CBX1P83916 185 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 TSPY1Q01534 308 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 CTXN3Q4LDR2 81 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 RTP2Q5QGT7 225 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 LRRC38Q5VT99 294 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 PMF1Q6P1K2 205 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 EMBQ6PCB8 327 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 ANKS1BQ7Z6G8 1248 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 DDX42Q86XP3 938 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLN8-204ENST00000519254 FUKQ8N0W3 1084 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 ARFGAP1Q8N6T3 406 aa15.2■□□□□ 0.02
CLN8-204ENST00000519254 C12orf50Q8NA57 414 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms