RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 LRCH4O75427 683 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 ERLIN1O75477 346 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 DGKIO75912 1065 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 GALTP07902 379 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 PTPN9P43378 593 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 GATMP50440 423 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 MAP3K7CLP57077 242 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 MRPS5P82675 430 aaKnown RBP15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 ADIGQ0VDE8 80 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 SMC1AQ14683 1233 aaKnown RBP15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 ZFYVE27Q5T4F4 411 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 ZNF280DQ6N043 979 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 FUT10Q6P4F1 479 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 MAATS1Q7Z4T9 603 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 SPATA2LQ8IUW3 424 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 CCDC50Q8IVM0 306 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 OR10T2Q8NGX3 314 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 FUBP3Q96I24 572 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 SMOQ99835 787 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 ZCWPW1Q9H0M4 648 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 PRDM10Q9NQV6 1147 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 MARCH5Q9NX47 278 aa15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 KIAA0100Q14667 2235 aaKnown RBP15.8■□□□□ 0.12
TRAPPC9-205ENST00000518839 CCDC151A5D8V7 595 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 TRIM43BA6NCK2 446 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 F8W810 466 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 DAB1O75553 588 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 GABBR2O75899 941 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 KRT1P04264 644 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 H2AFXP16104 143 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 FGFR3P22607 806 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 CHRNA3P32297 505 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 PTPN7P35236 360 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 FLT3P36888 993 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 SLC25A11Q02978 314 aaKnown RBP15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 SMARCB1Q12824 385 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 RAB41Q5JT25 222 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 VARS2Q5ST30 1063 aaKnown RBP15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 FAM171A1Q5VUB5 890 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 SCML4Q8N228 414 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 IRGQQ8WZA9 623 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 TOP1MTQ969P6 601 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 TRIM43Q96BQ3 446 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 KRT12Q99456 494 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 TRIM62Q9BVG3 475 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 AP1M1Q9BXS5 423 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 HOMER3Q9NSC5 361 aa15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.79■□□□□ 0.12
TRAPPC9-205ENST00000518839 PHF2O75151 1096 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 BEST1O76090 585 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 UPP2O95045 317 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 CSF2RAP15509 400 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 GJC1P36383 396 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 ALDH7A1P49419 539 aaKnown RBP15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 TKTL1P51854 596 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 BCAR1P56945 870 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 ADCY1Q08828 1119 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 MRPL58Q14197 206 aaKnown RBP15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 CYP1B1Q16678 543 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 CCDC142Q17RM4 750 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 CCDC14Q49A88 953 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 MAP9Q49MG5 647 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 CTXN3Q4LDR2 81 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 KLHL7Q8IXQ5 586 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 CMTR2Q8IYT2 770 aaKnown RBP15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 KHSRPQ92945 711 aaKnown RBP eCLIP15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 VWCEQ96DN2 955 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 PIWIL1Q96J94 861 aaKnown RBP15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 TBCBQ99426 244 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 LRRC1Q9BTT6 524 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 DDX23Q9BUQ8 820 aaKnown RBP15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 IL23AQ9NPF7 189 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 STIM2Q9P246 746 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 PRKAG2Q9UGJ0 569 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 STAP1Q9ULZ2 295 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 USP18Q9UMW8 372 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 EFR3BQ9Y2G0 817 aa15.78■□□□□ 0.12
TRAPPC9-205ENST00000518839 PRPSAP2O60256 369 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 GRAP2O75791 330 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 TRUB2O95900 331 aaKnown RBP15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 BDNFP23560 247 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 MIPP30301 263 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 NOS2P35228 1153 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 MATKP42679 507 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 YWHAZP63104 245 aaKnown RBP15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 PPIGQ13427 754 aaKnown RBP eCLIP15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 DHX34Q14147 1143 aaKnown RBP15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 BOLA3Q53S33 107 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 DAB2IPQ5VWQ8 1189 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 VSTM1Q6UX27 236 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 ANKS3Q6ZW76 656 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 STRADAQ7RTN6 431 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 LRRTM3Q86VH5 581 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 C12orf50Q8NA57 414 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 ZMIZ2Q8NF64 920 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 C2orf15Q8WU43 125 aaKnown RBP15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 TEKT4Q8WW24 435 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 SLITRK1Q96PX8 696 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 OSBPL8Q9BZF1 889 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms