RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 PLXND1Q9Y4D7 1925 aa13.21□□□□□ -0.3
TRAPPC9-204ENST00000518723 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.3
TRAPPC9-204ENST00000518723 PI4KAP42356 2102 aa13.21□□□□□ -0.3
TRAPPC9-204ENST00000518723 ANAPC1Q9H1A4 1944 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 TCRBV21S2A2A0A5A6 115 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 ZNF840PA6NDX5 716 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 PPP1R37O75864 691 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 ADH1CP00326 375 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 CD59P13987 128 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 UBA7P41226 1012 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 RESTQ13127 1097 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 SOWAHAQ2M3V2 549 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 SOWAHCQ53LP3 525 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 EMC10Q5UCC4 262 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 RHBDF2Q6PJF5 856 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 DENND5BQ6ZUT9 1274 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 DPH6Q7L8W6 267 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 ZNF720Q7Z2F6 126 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 LIMS2Q7Z4I7 341 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 C12orf40Q86WS4 652 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 MINDY1Q8N5J2 469 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 FAM213AQ9BRX8 229 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 GTPBP2Q9BX10 602 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 STRA6Q9BX79 667 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 IKZF4Q9H2S9 585 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 FSCN3Q9NQT6 498 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 ARHGEF4Q9NR80 690 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 MAGEC2Q9UBF1 373 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 CPQQ9Y646 472 aa13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 HELZ2Q9BYK8 2649 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-204ENST00000518723 APC2O95996 2303 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 ACACAQ13085 2346 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 ARHGAP33O14559 1287 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 HCRTO43612 131 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 OAS1P00973 400 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 ADH5P11766 374 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 PLCG1P19174 1290 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 USP46P62068 366 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 NOP14P78316 857 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 RBP5P82980 135 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 RPL6Q02878 288 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 SCAPQ12770 1279 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 SLC14A1Q13336 389 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 SCARA3Q6AZY7 606 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 TRMT11Q7Z4G4 463 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 PDZD3Q86UT5 571 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 DDX42Q86XP3 938 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 PGBD3Q8N328 593 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 PHTF2Q8N3S3 785 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 CSGALNACT2Q8N6G5 542 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 MYLPFQ96A32 169 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 RNF38Q9H0F5 515 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 RBAKQ9NYW8 714 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 SIX4Q9UIU6 781 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 CDH9Q9ULB4 789 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 KIF3AQ9Y496 699 aa13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 HELZP42694 1942 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-204ENST00000518723 PCDH15Q96QU1 1955 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 ATP2C2O75185 946 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 GJB3O75712 270 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 LDHAP00338 332 aaKnown RBP13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 SYPP08247 313 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 GABRG2P18507 467 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 BDNFP23560 247 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 GRIK1P39086 918 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 ZNF33AQ06730 810 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 MCTP1Q6DN14 999 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 ETFBKMTQ8IXQ9 262 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 KRI1Q8N9T8 703 aaKnown RBP13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 KBTBD7Q8WVZ9 684 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 ADAMTS14Q8WXS8 1223 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 LARP4BQ92615 738 aaKnown RBP13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 OTUB2Q96DC9 234 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 C8orf48Q96LL4 319 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 SYT15Q9BQS2 421 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 CRTAC1Q9NQ79 661 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 CFAP97Q9P2B7 532 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 TBC1D14Q9P2M4 693 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 SEL1LQ9UBV2 794 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 EXOC7Q9UPT5 735 aa13.18□□□□□ -0.3
TRAPPC9-204ENST00000518723 IGHV1OR15-9A0A0B4J2B8 117 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 E2F8A0AVK6 867 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 TRIM66O15016 1216 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 HOXC11O43248 304 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 KRT19P08727 400 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 GARTP22102 1010 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 LMO2P25791 158 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 ANXA13P27216 316 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 LONP1P36776 959 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 PSMC1P62191 440 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 KDSRQ06136 332 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 KCNA1Q09470 495 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 MYO1EQ12965 1108 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 TRIP6Q15654 476 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 PREPLQ4J6C6 727 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 L1TD1Q5T7N2 865 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 C19orf48Q6RUI8 117 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms