RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 DNAJB14Q8TBM8 379 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 ACTRT2Q8TDY3 377 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 FAM227BQ96M60 508 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 GDF15Q99988 308 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 TTPALQ9BTX7 342 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 MAGEB5Q9BZ81 275 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 CERS4Q9HA82 394 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 GBA2Q9HCG7 927 aaPredicted RBP4.42□□□□□ -1.7
VPS13B-207ENST00000518569 ZBTB26Q9HCK0 441 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 ARFGAP3Q9NP61 516 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 TRIM36Q9NQ86 728 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 TM7SF3Q9NS93 570 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 SERTAD4Q9NUC0 356 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 FOXJ2Q9P0K8 574 aa4.42□□□□□ -1.7
VPS13B-207ENST00000518569 A1L4Q6 167 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 SRGAP2O75044 1071 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 URI1O94763 535 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-207ENST00000518569 TJP3O95049 919 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 PDHA1P08559 390 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 SETSIPP0DME0 302 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 HARSP12081 509 aaKnown RBP4.41□□□□□ -1.7
VPS13B-207ENST00000518569 IDEP14735 1019 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 TYRP1P17643 537 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 PROZP22891 400 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 EEF1GP26641 437 aaKnown RBP4.41□□□□□ -1.7
VPS13B-207ENST00000518569 ADORA2AP29274 412 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 SERPINB3P29508 390 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 UQCRC1P31930 480 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 LIPAP38571 399 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 ALDH9A1P49189 494 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 RARRES1P49788 294 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 MAPK10P53779 464 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 TGFB2P61812 414 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 TIAL1Q01085 375 aaKnown RBP eCLIP4.41□□□□□ -1.7
VPS13B-207ENST00000518569 BIRC2Q13490 618 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 SLC35G1Q2M3R5 365 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 ERCC6LQ2NKX8 1250 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 TREML2Q5T2D2 321 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 DEPDC1Q5TB30 811 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 WDR53Q7Z5U6 358 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-207ENST00000518569 RAB11FIP4Q86YS3 637 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 SPICE1Q8N0Z3 855 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 TXLNBQ8N3L3 684 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 CCDC150Q8NCX0 1101 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 RP9Q8TA86 221 aaKnown RBP4.41□□□□□ -1.7
VPS13B-207ENST00000518569 TFAP2BQ92481 460 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 GLG1Q92896 1179 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 SNX27Q96L92 541 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 RPS6KC1Q96S38 1066 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 MPHOSPH6Q99547 160 aaKnown RBP4.41□□□□□ -1.7
VPS13B-207ENST00000518569 INO80BQ9C086 356 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-207ENST00000518569 ING1Q9UK53 422 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-207ENST00000518569 USP22Q9UPT9 525 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 MAN2B2Q9Y2E5 1009 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 CEP83Q9Y592 693 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 SNX14Q9Y5W7 946 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 SALL3Q9BXA9 1300 aa4.41□□□□□ -1.7
VPS13B-207ENST00000518569 A0A087WZ62 844 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 ABHD14A-ACY1A0A1B0GW23 586 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 GCOM1H8Y6P7 765 aaPredicted RBP4.4□□□□□ -1.71
VPS13B-207ENST00000518569 M0R3H8 397 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 PLA2G6O60733 806 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 TTLL1O95922 423 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 PRKCBP05771 671 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 IL6RP08887 468 aaPredicted RBP4.4□□□□□ -1.71
VPS13B-207ENST00000518569 GABRB3P28472 473 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 HSPA7P48741 367 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 SIM1P81133 766 aaPredicted RBP4.4□□□□□ -1.71
VPS13B-207ENST00000518569 EIF2B5Q13144 721 aaKnown RBP4.4□□□□□ -1.71
VPS13B-207ENST00000518569 MPEG1Q2M385 716 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 PRR16Q569H4 304 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 MANEALQ5VSG8 457 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 RRAGBQ5VZM2 374 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 XRRA1Q6P2D8 792 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 ANKRD16Q6P6B7 361 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 MTHFD1LQ6UB35 978 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 PCSK4Q6UW60 755 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 KIAA0408Q6ZU52 694 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 GRASPQ7Z6J2 395 aaPredicted RBP4.4□□□□□ -1.71
VPS13B-207ENST00000518569 PEG10Q86TG7 708 aaKnown RBP4.4□□□□□ -1.71
VPS13B-207ENST00000518569 CAGE1Q8TC20 777 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 TMEM171Q8WVE6 324 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 ZNF566Q969W8 418 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 KIAA1191Q96A73 305 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 LRRC46Q96FV0 321 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 TMEM41AQ96HV5 264 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 C17orf80Q9BSJ5 609 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 VN1R3Q9BXE9 311 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 ALG13Q9NP73 1137 aaKnown RBP4.4□□□□□ -1.71
VPS13B-207ENST00000518569 NECTIN3Q9NQS3 549 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 ARHGEF3Q9NR81 526 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 GJB4Q9NTQ9 266 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 DKK3Q9UBP4 350 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 DNAJB11Q9UBS4 358 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 VPS51Q9UID3 782 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 GABRQQ9UN88 632 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 COMMD10Q9Y6G5 202 aa4.4□□□□□ -1.71
VPS13B-207ENST00000518569 DLDP09622 509 aaKnown RBP4.39□□□□□ -1.71
VPS13B-207ENST00000518569 NR2F6P10588 404 aa4.39□□□□□ -1.71
VPS13B-207ENST00000518569 CD19P15391 556 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms