RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CYP26B1Q9NR63 512 aa3□□□□□ -1.93
SKP1-204ENST00000517691 RASSF1Q9NS23 344 aa3□□□□□ -1.93
SKP1-204ENST00000517691 IFT80Q9P2H3 777 aaPredicted RBP3□□□□□ -1.93
SKP1-204ENST00000517691 WRAP73Q9P2S5 460 aaPredicted RBP3□□□□□ -1.93
SKP1-204ENST00000517691 APEX2Q9UBZ4 518 aa3□□□□□ -1.93
SKP1-204ENST00000517691 NDOR1Q9UHB4 597 aa3□□□□□ -1.93
SKP1-204ENST00000517691 CFAP45Q9UL16 551 aa3□□□□□ -1.93
SKP1-204ENST00000517691 TBX21Q9UL17 535 aa3□□□□□ -1.93
SKP1-204ENST00000517691 AKT3Q9Y243 479 aa3□□□□□ -1.93
SKP1-204ENST00000517691 PCDHA2Q9Y5H9 948 aa3□□□□□ -1.93
SKP1-204ENST00000517691 SNX5Q9Y5X3 404 aa3□□□□□ -1.93
SKP1-204ENST00000517691 MKI67P46013 3256 aaKnown RBP3□□□□□ -1.93
SKP1-204ENST00000517691 IGSF9BQ9UPX0 1349 aa3□□□□□ -1.93
SKP1-204ENST00000517691 TNRC18O15417 2968 aaPredicted RBP3□□□□□ -1.93
SKP1-204ENST00000517691 SMIM35A0A1B0GVV1 85 aa3□□□□□ -1.93
SKP1-204ENST00000517691 GTPBP10A4D1E9 387 aaKnown RBP3□□□□□ -1.93
SKP1-204ENST00000517691 MBLAC1A4D2B0 266 aaPredicted RBP3□□□□□ -1.93
SKP1-204ENST00000517691 ANKRD34BA5PLL1 514 aa3□□□□□ -1.93
SKP1-204ENST00000517691 ARHGEF35A5YM69 484 aa3□□□□□ -1.93
SKP1-204ENST00000517691 TRIM64CA6NLI5 447 aa3□□□□□ -1.93
SKP1-204ENST00000517691 SPTLC2O15270 562 aa3□□□□□ -1.93
SKP1-204ENST00000517691 USO1O60763 962 aaKnown RBP3□□□□□ -1.93
SKP1-204ENST00000517691 NPTXRO95502 500 aa3□□□□□ -1.93
SKP1-204ENST00000517691 C22orf31O95567 290 aa3□□□□□ -1.93
SKP1-204ENST00000517691 CNOT4O95628 575 aaKnown RBP3□□□□□ -1.93
SKP1-204ENST00000517691 VTNP04004 478 aa3□□□□□ -1.93
SKP1-204ENST00000517691 ITGAVP06756 1048 aa3□□□□□ -1.93
SKP1-204ENST00000517691 SRGAP2CP0DJJ0 459 aa3□□□□□ -1.93
SKP1-204ENST00000517691 GHRP10912 638 aa3□□□□□ -1.93
SKP1-204ENST00000517691 HSD3B1P14060 373 aa3□□□□□ -1.93
SKP1-204ENST00000517691 RPA1P27694 616 aa3□□□□□ -1.93
SKP1-204ENST00000517691 HOXD12P35452 270 aa3□□□□□ -1.93
SKP1-204ENST00000517691 LONP1P36776 959 aaKnown RBP3□□□□□ -1.93
SKP1-204ENST00000517691 ME1P48163 572 aa3□□□□□ -1.93
SKP1-204ENST00000517691 CLCN3P51790 818 aa3□□□□□ -1.93
SKP1-204ENST00000517691 ZNF143P52747 638 aaPredicted RBP3□□□□□ -1.93
SKP1-204ENST00000517691 ADAM17P78536 824 aa3□□□□□ -1.93
SKP1-204ENST00000517691 NUCB2P80303 420 aa3□□□□□ -1.93
SKP1-204ENST00000517691 MRPS6P82932 125 aaKnown RBP3□□□□□ -1.93
SKP1-204ENST00000517691 PFKPQ01813 784 aa3□□□□□ -1.93
SKP1-204ENST00000517691 PRKG2Q13237 762 aa3□□□□□ -1.93
SKP1-204ENST00000517691 SLC39A14Q15043 492 aa3□□□□□ -1.93
SKP1-204ENST00000517691 KIZQ2M2Z5 673 aa3□□□□□ -1.93
SKP1-204ENST00000517691 BBS9Q3SYG4 887 aa3□□□□□ -1.93
SKP1-204ENST00000517691 SV2CQ496J9 727 aa3□□□□□ -1.93
SKP1-204ENST00000517691 PRAMEF13Q5VWM6 474 aa3□□□□□ -1.93
SKP1-204ENST00000517691 FAAH2Q6GMR7 532 aa3□□□□□ -1.93
SKP1-204ENST00000517691 PGM2L1Q6PCE3 622 aa3□□□□□ -1.93
SKP1-204ENST00000517691 ZNF365Q70YC5 407 aa3□□□□□ -1.93
SKP1-204ENST00000517691 OTOP2Q7RTS6 562 aa3□□□□□ -1.93
SKP1-204ENST00000517691 GPR155Q7Z3F1 870 aa3□□□□□ -1.93
SKP1-204ENST00000517691 CABP7Q86V35 215 aa3□□□□□ -1.93
SKP1-204ENST00000517691 DTX1Q86Y01 620 aa3□□□□□ -1.93
SKP1-204ENST00000517691 RHPN2Q8IUC4 686 aa3□□□□□ -1.93
SKP1-204ENST00000517691 CMIPQ8IY22 773 aa3□□□□□ -1.93
SKP1-204ENST00000517691 C4orf19Q8IY42 314 aa3□□□□□ -1.93
SKP1-204ENST00000517691 KIAA0319LQ8IZA0 1049 aa3□□□□□ -1.93
SKP1-204ENST00000517691 IGSF22Q8N9C0 903 aa3□□□□□ -1.93
SKP1-204ENST00000517691 C2CD4AQ8NCU7 369 aaPredicted RBP3□□□□□ -1.93
SKP1-204ENST00000517691 C1orf162Q8NEQ5 155 aaPredicted RBP3□□□□□ -1.93
SKP1-204ENST00000517691 NEK9Q8TD19 979 aa3□□□□□ -1.93
SKP1-204ENST00000517691 CYB5D2Q8WUJ1 264 aa3□□□□□ -1.93
SKP1-204ENST00000517691 ATP6V1E2Q96A05 226 aa3□□□□□ -1.93
SKP1-204ENST00000517691 TMEM143Q96AN5 459 aa3□□□□□ -1.93
SKP1-204ENST00000517691 CALML4Q96GE6 196 aa3□□□□□ -1.93
SKP1-204ENST00000517691 UBXN10Q96LJ8 280 aa3□□□□□ -1.93
SKP1-204ENST00000517691 CLIC6Q96NY7 704 aa3□□□□□ -1.93
SKP1-204ENST00000517691 CTAGE1Q96RT6 745 aa3□□□□□ -1.93
SKP1-204ENST00000517691 USP28Q96RU2 1077 aa3□□□□□ -1.93
SKP1-204ENST00000517691 MAP7D2Q96T17 732 aa3□□□□□ -1.93
SKP1-204ENST00000517691 JPH2Q9BR39 696 aaPredicted RBP3□□□□□ -1.93
SKP1-204ENST00000517691 POLR3CQ9BUI4 534 aaPredicted RBP3□□□□□ -1.93
SKP1-204ENST00000517691 MENTQ9BUN1 341 aa3□□□□□ -1.93
SKP1-204ENST00000517691 PANK2Q9BZ23 570 aa3□□□□□ -1.93
SKP1-204ENST00000517691 CELF4Q9BZC1 486 aaKnown RBP3□□□□□ -1.93
SKP1-204ENST00000517691 WNT8AQ9H1J5 351 aa3□□□□□ -1.93
SKP1-204ENST00000517691 MYLK2Q9H1R3 596 aa3□□□□□ -1.93
SKP1-204ENST00000517691 ATXN3LQ9H3M9 355 aa3□□□□□ -1.93
SKP1-204ENST00000517691 IL23AQ9NPF7 189 aa3□□□□□ -1.93
SKP1-204ENST00000517691 DDX19AQ9NUU7 478 aaKnown RBP3□□□□□ -1.93
SKP1-204ENST00000517691 SUCLA2Q9P2R7 463 aaPredicted RBP3□□□□□ -1.93
SKP1-204ENST00000517691 GIMAP2Q9UG22 337 aa3□□□□□ -1.93
SKP1-204ENST00000517691 ODF2LQ9ULJ1 636 aa3□□□□□ -1.93
SKP1-204ENST00000517691 POLHQ9Y253 713 aa3□□□□□ -1.93
SKP1-204ENST00000517691 ZDHHC9Q9Y397 364 aa3□□□□□ -1.93
SKP1-204ENST00000517691 ZNF451Q9Y4E5 1061 aa3□□□□□ -1.93
SKP1-204ENST00000517691 ATP6V1DQ9Y5K8 247 aa3□□□□□ -1.93
SKP1-204ENST00000517691 CDY2AQ9Y6F7 541 aa3□□□□□ -1.93
SKP1-204ENST00000517691 COL1A2P08123 1366 aa3□□□□□ -1.93
SKP1-204ENST00000517691 LCTP09848 1927 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 MYH6P13533 1939 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 TRAV20A0A0B4J274 112 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.99□□□□□ -1.93
SKP1-204ENST00000517691 TISP43B9A030 160 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 B9A039 149 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 E9PMD0 336 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 SHOXO15266 292 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 TBX1O43435 398 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 PLOD3O60568 738 aa2.99□□□□□ -1.93
SKP1-204ENST00000517691 MAFO75444 373 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms