RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 MAGEC2Q9UBF1 373 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-204ENST00000517386 CCDC39Q9UFE4 941 aa8.39□□□□□ -1.07
HMBOX1-204ENST00000517386 EXOC7Q9UPT5 735 aa8.39□□□□□ -1.07
HMBOX1-204ENST00000517386 R3HCC1Q9Y3T6 440 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-204ENST00000517386 PKD1L2Q7Z442 2459 aa8.39□□□□□ -1.07
HMBOX1-204ENST00000517386 GREB1Q4ZG55 1949 aa8.39□□□□□ -1.07
HMBOX1-204ENST00000517386 FREM2Q5SZK8 3169 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 OBSL1O75147 1896 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 ATXN2Q99700 1313 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 LNP1A1A4G5 178 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 BCLAF3A2AJT9 711 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 F8VP50 259 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 K7EQS6 105 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 LEFTY2O00292 366 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 CLDN5O00501 218 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 RHOBTB1O94844 696 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 KLF8O95600 359 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 BMP15O95972 392 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 DLATP10515 647 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 GAP43P17677 238 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 SCP2P22307 547 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 PCSK1P29120 753 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 OPRD1P41143 372 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 MAPK8P45983 427 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 ZNF268Q14587 947 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 GAB4Q2WGN9 574 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 SH3PXD2AQ5TCZ1 1133 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 FOXD4L5Q5VV16 416 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 SYT13Q7L8C5 426 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 C12orf40Q86WS4 652 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 TMEFF1Q8IYR6 380 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 TMEM86AQ8N2M4 240 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 CAMKK1Q8N5S9 505 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 ALLCQ8N6M5 410 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 LRRC52Q8N7C0 313 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 MDGA1Q8NFP4 955 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 USP33Q8TEY7 942 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 LEO1Q8WVC0 666 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 FOXD4L4Q8WXT5 416 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 DDX1Q92499 740 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 ACDQ96AP0 544 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 TRMT2BQ96GJ1 504 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 ANKRD36BP1Q96IX9 119 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 LOXL4Q96JB6 756 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 ZC3H10Q96K80 434 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 MRPL45Q9BRJ2 306 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 DPEP3Q9H4B8 488 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 TMEM206Q9H813 350 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 ABCB6Q9NP58 842 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 TMEM30AQ9NV96 361 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 GDAP2Q9NXN4 497 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 TRPM5Q9NZQ8 1165 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 CFAP97Q9P2B7 532 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 UXTQ9UBK9 157 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 ITGA11Q9UKX5 1188 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 NME7Q9Y5B8 376 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 CPQQ9Y646 472 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 DENND4CQ5VZ89 1909 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 BAHCC1Q9P281 2608 aa8.38□□□□□ -1.07
HMBOX1-204ENST00000517386 CCDC163A0A0D9SF12 145 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 SGK1O00141 431 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 GABRDO14764 452 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 CLIC2O15247 247 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 FOXD2O60548 495 aaPredicted RBP8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 NFATC1O95644 943 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 TNNC2P02585 160 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 CYP17A1P05093 508 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 IRF1P10914 325 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 GARTP22102 1010 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 ANXA13P27216 316 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 CASP1P29466 404 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 ABCD1P33897 745 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 HOXD13P35453 343 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 TXLNAP40222 546 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 WASP42768 502 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 LHX1P48742 406 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 CYP2J2P51589 502 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 LIMK1P53667 647 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 IRX4P78413 519 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 ZNF252P-AS1Q0IIN9 211 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 MYO1EQ12965 1108 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 RESTQ13127 1097 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 NR1H3Q13133 447 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 FOXD4L6Q3SYB3 417 aaPredicted RBP8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 CFAP221Q4G0U5 840 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 FBXO43Q4G163 708 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 USP39Q53GS9 565 aaKnown RBP8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 FAM171BQ6P995 826 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 FOXD4L3Q6VB84 417 aaPredicted RBP8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 C4orf50Q6ZRC1 276 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 CYP2U1Q7Z449 544 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 NT5DC4Q86YG4 428 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 NELFCDQ8IXH7 590 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 PGBD3Q8N328 593 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 GPD1LQ8N335 351 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 TOP6BLQ8N6T0 577 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 NAT16Q8N8M0 369 aa8.37□□□□□ -1.07
HMBOX1-204ENST00000517386 FSIP1Q8NA03 581 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms