RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 CREBRFQ8IUR6 639 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 ZC3H3Q8IXZ2 948 aaKnown RBP7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 FUKQ8N0W3 1084 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CPA6Q8N4T0 437 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 ARL14EPQ8N8R7 260 aaPredicted RBP7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 SLC2A14Q8TDB8 520 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 OVCA2Q8WZ82 227 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 USP13Q92995 863 aaPredicted RBP7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 ATP2A3Q93084 1043 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 ELMO3Q96BJ8 720 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CYFIP2Q96F07 1278 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 ZFYVE19Q96K21 471 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 HEXIM2Q96MH2 286 aaKnown RBP7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 KCNK16Q96T55 309 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 IER2Q9BTL4 223 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 TTLL2Q9BWV7 592 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 SMG9Q9H0W8 520 aaKnown RBP7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 SDCBP2Q9H190 292 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 TLR8Q9NR97 1041 aaKnown RBP7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 GKN1Q9NS71 199 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 FAM49BQ9NUQ9 324 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 DUS2Q9NX74 493 aaKnown RBP7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 GTSE1Q9NYZ3 720 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 DACH1Q9UI36 760 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 NME7Q9Y5B8 376 aa7.55□□□□□ -1.2
SCARNA18.2-201ENST00000516882 COL4A3Q01955 1670 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 EML5Q05BV3 1969 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 C2orf78A6NCI8 922 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 ZNF840PA6NDX5 716 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 PPP1R3GB7ZBB8 358 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 SPECC1L-ADORA2AF8WAN1 911 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 ARNTLO00327 626 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 SLC9A3R1O14745 358 aaPredicted RBP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 P4HA2O15460 535 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CILPO75339 1184 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 TADA3O75528 432 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 MBL2P11226 248 aaPredicted RBP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CD44P16070 742 aaKnown RBP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 TARSP26639 723 aaKnown RBP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CTHP32929 405 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 FMO5P49326 533 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 MRE11P49959 708 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 SLC5A3P53794 718 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 STX17P56962 302 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 MCCD1P59942 119 aaPredicted RBP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 USP46P62068 366 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 GOLGA8FQ08AF8 430 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 GOLGA8DPQ0D2H9 430 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 GRSF1Q12849 480 aaKnown RBP eCLIP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CBWD6Q4V339 395 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CBWD3Q5JTY5 395 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 DGKKQ5KSL6 1271 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CBWD5Q5RIA9 395 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 HECTD3Q5T447 861 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 TTI2Q6NXR4 508 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 TADA2BQ86TJ2 420 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 ALYREFQ86V81 257 aaKnown RBP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 C12orf29Q8N999 325 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 MLKLQ8NB16 471 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 TTC8Q8TAM2 541 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 SH3RF2Q8TEC5 729 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 OSCP1Q8WVF1 389 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 SEMA4DQ92854 862 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 SLC35C1Q96A29 364 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CLDN23Q96B33 292 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 RSPRY1Q96DX4 576 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 TMEM176AQ96HP8 235 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 NT5C1BQ96P26 610 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CYP2S1Q96SQ9 504 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 HNRNPABQ99729 332 aaKnown RBP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 SRRTQ9BXP5 876 aaKnown RBP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 NUP62CLQ9H1M0 184 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 EBF3Q9H4W6 596 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 LMAN1LQ9HAT1 526 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 APOBEC3GQ9HC16 384 aaKnown RBP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 PNPLA8Q9NP80 782 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CISHQ9NSE2 258 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 FAM86C1Q9NVL1 165 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 HMGXB4Q9UGU5 601 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 ARHGAP26Q9UNA1 814 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CCL26Q9Y258 94 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 COQ4Q9Y3A0 265 aa7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 MTF2Q9Y483 593 aaPredicted RBP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.54□□□□□ -1.2
SCARNA18.2-201ENST00000516882 NCANO14594 1321 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 THADAQ6YHU6 1953 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 NUP205Q92621 2012 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 PMM2O15305 246 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 LRRN2O75325 713 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 NFATC1O95644 943 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 TCF3P15923 654 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 ACO1P21399 889 aaKnown RBP7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 PI4KAP42356 2102 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 PSEN1P49768 467 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 TUBP50607 506 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CCR3P51677 355 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 CACNA2D1P54289 1103 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 NRLP54845 237 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 SLC7A9P82251 487 aa7.53□□□□□ -1.2
SCARNA18.2-201ENST00000516882 TNK2Q07912 1038 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms