RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 ITIH3Q06033 890 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 ICAM4Q14773 271 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 R3HDM1Q15032 1099 aaKnown RBP3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 ADCK5Q3MIX3 580 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 RBM20Q5T481 1227 aaKnown RBP3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 ATPAF1Q5TC12 328 aaPredicted RBP3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 ERICH6BQ5W0A0 696 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 LIN54Q6MZP7 749 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 RAB11FIP2Q7L804 512 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 HERC6Q8IVU3 1022 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 ABRAQ8N0Z2 381 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 LNX2Q8N448 690 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 NAXEQ8NCW5 288 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 OR6Y1Q8NGX8 325 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 SUN3Q8TAQ9 357 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 CXorf38Q8TB03 319 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 STYXQ8WUJ0 223 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 FAM136AQ96C01 138 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 PHACTR3Q96KR7 559 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 ZSCAN31Q96LW9 406 aaPredicted RBP3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 CDK5RAP1Q96SZ6 601 aaKnown RBP3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 RTKNQ9BST9 563 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 TTPALQ9BTX7 342 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 SORBS1Q9BX66 1292 aaKnown RBP3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 VN1R3Q9BXE9 311 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 C1QTNF3Q9BXJ4 246 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 UNC45AQ9H3U1 944 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 SMOC2Q9H3U7 446 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 AKIP1Q9NQ31 210 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 TMLHEQ9NVH6 421 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 PARPBPQ9NWS1 579 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 C9orf78Q9NZ63 289 aaPredicted RBP3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 TRPM5Q9NZQ8 1165 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 SRP68Q9UHB9 627 aaKnown RBP3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 NOX1Q9Y5S8 564 aa3.84□□□□□ -1.79
RNU6-390P-201ENST00000516259 ADAMTS20P59510 1910 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 GXYLT2A0PJZ3 443 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 ZAR1LA6NP61 321 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 A8MVJ9 347 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 PRRT4C9JH25 899 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 F5H697 171 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 RGS10O43665 173 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 ASNA1O43681 348 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 LPXNO60711 386 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 SNX2O60749 519 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 CBFA2T3O75081 653 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 WDHD1O75717 1129 aaPredicted RBP3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 CDKL5O76039 1030 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 ACTL6BO94805 426 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 SCAF4O95104 1147 aaKnown RBP3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 RASAL1O95294 804 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 PECAM1P16284 738 aaPredicted RBP3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 RBL1P28749 1068 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 ADD2P35612 726 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 ATXN1P54253 815 aaKnown RBP3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 PNLIPRP1P54315 467 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 PRKAG1P54619 331 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 TIRAPP58753 221 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 MC2RQ01718 297 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 GPS1Q13098 491 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 CRHR2Q13324 411 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 ACOX1Q15067 660 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 ARHGAP15Q53QZ3 475 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 TMEM63BQ5T3F8 832 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 CACHD1Q5VU97 1274 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 NFRKBQ6P4R8 1299 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 GGT6Q6P531 493 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 KLHL17Q6TDP4 642 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 MTHFD1LQ6UB35 978 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 SLC30A10Q6XR72 485 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 KCTD20Q7Z5Y7 419 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 ANKS1BQ7Z6G8 1248 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 TTC30AQ86WT1 665 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 PAF1Q8N7H5 531 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 USP38Q8NB14 1042 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 NSUN7Q8NE18 718 aaKnown RBP3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 SOCS4Q8WXH5 440 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 LENG9Q96B70 501 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 NACC2Q96BF6 587 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 ZSWIM1Q9BR11 485 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 ALG8Q9BVK2 526 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 UNKLQ9H9P5 680 aaKnown RBP3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 PI4KBQ9UBF8 816 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 C19orf53Q9UNZ5 99 aaPredicted RBP3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 FZD1Q9UP38 647 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 SORCS3Q9UPU3 1222 aa3.83□□□□□ -1.8
RNU6-390P-201ENST00000516259 AATKQ6ZMQ8 1374 aa3.82□□□□□ -1.8
RNU6-390P-201ENST00000516259 CCDC196A0A1B0GTZ2 297 aa3.82□□□□□ -1.8
RNU6-390P-201ENST00000516259 TRIM38O00635 465 aa3.82□□□□□ -1.8
RNU6-390P-201ENST00000516259 KIAA0355O15063 1070 aa3.82□□□□□ -1.8
RNU6-390P-201ENST00000516259 SRGAP2O75044 1071 aa3.82□□□□□ -1.8
RNU6-390P-201ENST00000516259 TJP3O95049 919 aa3.82□□□□□ -1.8
RNU6-390P-201ENST00000516259 ZFPL1O95159 310 aa3.82□□□□□ -1.8
RNU6-390P-201ENST00000516259 LARGE1O95461 756 aa3.82□□□□□ -1.8
RNU6-390P-201ENST00000516259 TFRCP02786 760 aaKnown RBP3.82□□□□□ -1.8
RNU6-390P-201ENST00000516259 TK1P04183 234 aa3.82□□□□□ -1.8
RNU6-390P-201ENST00000516259 PRKCBP05771 671 aa3.82□□□□□ -1.8
RNU6-390P-201ENST00000516259 DDX6P26196 483 aaKnown RBP eCLIP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms