RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 DDX56Q9NY93 547 aaKnown RBP8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 HCSTQ9UBK5 93 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PRKAG2Q9UGJ0 569 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TMEM59LQ9UK28 342 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 COL4A6Q14031 1691 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TARSL2A2RTX5 802 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 OR6C75A6NL08 312 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 NT5C1B-RDH14C9J2C7 533 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 H7C4K7 107 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 DPYSL4O14531 572 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SART1O43290 800 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 HSF2BPO75031 334 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 LRCH4O75427 683 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 BAIAP3O94812 1187 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FBXO21O94952 628 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 KRT1P04264 644 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 KRT7P08729 469 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TCF4P15884 667 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 EN2P19622 333 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FGFR3P22607 806 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 BDNFP23560 247 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 MCM3P25205 808 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FLT3P36888 993 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ALDH7A1P49419 539 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TKTL1P51854 596 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CDR1P51861 262 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 WDR5P61964 334 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ADCY1Q08828 1119 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TAF5Q15542 800 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PPP2R5EQ16537 467 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 NFE2Q16621 373 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CDO1Q16878 200 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CTXN3Q4LDR2 81 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 GLE1Q53GS7 698 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SPOUT1Q5T280 376 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 C8orf74Q6P047 294 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 AADACL2Q6P093 401 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ARCQ7LC44 396 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 POLNQ7Z5Q5 900 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 UBE2Q1Q7Z7E8 422 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 LRRTM3Q86VH5 581 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CEP57Q86XR8 500 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SLC13A5Q86YT5 568 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CCDC50Q8IVM0 306 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RCOR2Q8IZ40 523 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CLEC4CQ8WTT0 213 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 MAIP1Q8WWC4 291 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ANKRD7Q92527 254 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 KHSRPQ92945 711 aaKnown RBP eCLIP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RBM41Q96IZ5 413 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TMEM209Q96SK2 561 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 KCNK16Q96T55 309 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 KRT12Q99456 494 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SMOQ99835 787 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 AP1M1Q9BXS5 423 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 OXCT2Q9BYC2 517 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 GPR62Q9BZJ7 368 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ZCWPW1Q9H0M4 648 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 EPC1Q9H2F5 836 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ANKZF1Q9H8Y5 726 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CSNK1G1Q9HCP0 422 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 NGRNQ9NPE2 291 aaKnown RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CNGB3Q9NQW8 809 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TMLHEQ9NVH6 421 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ARGLU1Q9NWB6 273 aaPredicted RBP8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 MTUS1Q9ULD2 1270 aa8.01□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CARNS1A5YM72 827 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PRPSAP2O60256 369 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 DAB1O75553 588 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 GLI1P08151 1106 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 OR4Q2P0C623 313 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ACRP10323 421 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 MIPP30301 263 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PCK1P35558 622 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PBX3P40426 434 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PTPN9P43378 593 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CACNA2D1P54289 1103 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 DAOAP59103 153 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 COPS2P61201 443 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 DEFB103AP81534 67 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 MRPS5P82675 430 aaKnown RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ATP11AP98196 1134 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SLC25A11Q02978 314 aaKnown RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PPIGQ13427 754 aaKnown RBP eCLIP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 MRPL58Q14197 206 aaKnown RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 BTG3Q14201 252 aaPredicted RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 C15orf59Q2T9L4 293 aaPredicted RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CCDC14Q49A88 953 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SLC39A12Q504Y0 691 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RAB41Q5JT25 222 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TRNP1Q6NT89 227 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FAM117BQ6P1L5 589 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ANKS3Q6ZW76 656 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ADAT2Q7Z6V5 191 aaKnown RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 KLHL7Q8IXQ5 586 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CMTR2Q8IYT2 770 aaKnown RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ARFGAP1Q8N6T3 406 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ZMIZ2Q8NF64 920 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RNF25Q96BH1 459 aaPredicted RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FAM149B1Q96BN6 582 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms