RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 MCRS1Q96EZ8 462 aa4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 MARS2Q96GW9 593 aaKnown RBP4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 ZNF512Q96ME7 567 aaPredicted RBP4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 TRIM5Q9C035 493 aa4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 BRD8Q9H0E9 1235 aa4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 CXorf36Q9H7Y0 433 aa4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 ANKEF1Q9NU02 776 aa4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 NTMQ9P121 344 aa4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 GPR34Q9UPC5 381 aa4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 CDYLQ9Y232 598 aa4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 CNPY2Q9Y2B0 182 aa4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 RAD54BQ9Y620 910 aa4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 CYP46A1Q9Y6A2 500 aa4.83□□□□□ -1.64
RNU6-488P-201ENST00000515918 A0A1B0GTL3 188 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 SH3D21A4FU49 640 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 C9orf118A6NHY6 69 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 ADM5C9JUS6 153 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 STX16-NPEPL1H3BU86 382 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 STX16O14662 325 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 CD3EAPO15446 510 aaKnown RBP4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 ZSCAN9O15535 394 aaPredicted RBP4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 RGS10O43665 173 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 ORC4O43929 436 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 SRGAP2O75044 1071 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 ZBED4O75132 1171 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 RPP40O75818 363 aaKnown RBP4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 CSF1P09603 554 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 GCSHP23434 173 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 LRPAP1P30533 357 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 NTSR1P30989 418 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 GCLCP48506 637 aaPredicted RBP4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 CHN2P52757 468 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 SETQ01105 290 aaPredicted RBP4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 NRN1LQ496H8 165 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 WDR45BQ5MNZ6 344 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 METRNLQ641Q3 311 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 TTLL5Q6EMB2 1281 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 FAM111BQ6SJ93 734 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 FAM83AQ86UY5 434 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 CHD1LQ86WJ1 897 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 SYT12Q8IV01 421 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 GALNT4Q8N4A0 578 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 ZNF483Q8TF39 744 aaPredicted RBP4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 ZDHHC12Q96GR4 267 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 SIGLEC10Q96LC7 697 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 SMOQ99835 787 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 MECRQ9BV79 373 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 ACAD9Q9H845 621 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 NOD2Q9HC29 1040 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 GBA2Q9HCG7 927 aaPredicted RBP4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 HSFX1Q9UBD0 423 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 DNAJB11Q9UBS4 358 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 TBX20Q9UMR3 447 aa4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 RRP7AQ9Y3A4 280 aaKnown RBP4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 OAS3Q9Y6K5 1087 aaKnown RBP4.82□□□□□ -1.64
RNU6-488P-201ENST00000515918 A0A1W2PRX2 142 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 VWA3AA6NCI4 1184 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 KIF28PB7ZC32 967 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 BIN1O00499 593 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 SPTLC2O15270 562 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 AHCYL1O43865 530 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 CBFA2T3O75081 653 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 TIPRLO75663 272 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 TMEM63AO94886 807 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 CER1O95813 267 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 TFRCP02786 760 aaKnown RBP4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 CSF1RP07333 972 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 ABCD3P28288 659 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 SERPINA4P29622 427 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 HOXD12P35452 270 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 KCNC1P48547 511 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 PXNP49023 591 aaPredicted RBP4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 CDK7P50613 346 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 RBM5P52756 815 aaKnown RBP eCLIP4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 DRG2P55039 364 aaKnown RBP4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 LOXL3P58215 753 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 SSPNQ14714 243 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 RPS6KA2Q15349 733 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 DRICH1Q6PGQ1 229 aaPredicted RBP4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 TMEM108Q6UXF1 575 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 TMPRSS9Q7Z410 1059 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 LSMEM1Q8N8F7 131 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 OR52N2Q8NGI0 321 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 ADAMTS17Q8TE56 1095 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 ABHD5Q8WTS1 349 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 TBC1D22AQ8WUA7 517 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 WDR60Q8WVS4 1066 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 RNF125Q96EQ8 232 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 ZBTB45Q96K62 511 aaPredicted RBP4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 PHACTR3Q96KR7 559 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 WDR24Q96S15 920 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 NEU1Q99519 415 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 DPYSL5Q9BPU6 564 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 CPPED1Q9BRF8 314 aaPredicted RBP4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 SDF4Q9BRK5 362 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 GHITMQ9H3K2 345 aa4.81□□□□□ -1.64
RNU6-488P-201ENST00000515918 IL21RQ9HBE5 538 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms