RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 AP1G2O75843 785 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 ASS1P00966 412 aaKnown RBP14.5□□□□□ -0.09
TCOF1-215ENST00000515516 TRIM49P0CI25 452 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 TRIM49CP0CI26 452 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 MBL2P11226 248 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-215ENST00000515516 GCLMP48507 274 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 FNTBP49356 437 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 NDST1P52848 882 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 CACNA2D1P54289 1103 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 SLC7A9P82251 487 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 SIM2Q14190 667 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-215ENST00000515516 EML3Q32P44 896 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 FBXO43Q4G163 708 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 HEATR6Q6AI08 1181 aaKnown RBP14.5□□□□□ -0.09
TCOF1-215ENST00000515516 FSTL4Q6MZW2 842 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 DDX42Q86XP3 938 aaKnown RBP eCLIP14.5□□□□□ -0.09
TCOF1-215ENST00000515516 KIAA1958Q8N8K9 716 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 CCDC26Q8TAB7 109 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 CD101Q93033 1021 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 KCNK16Q96T55 309 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 TSG101Q99816 390 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 SDCBP2Q9H190 292 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 CYP3A43Q9HB55 503 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.5□□□□□ -0.092e-6■■■■■ 145.4
TCOF1-215ENST00000515516 COMMD8Q9NX08 183 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 CPQQ9Y646 472 aa14.5□□□□□ -0.09
TCOF1-215ENST00000515516 MYO15AQ9UKN7 3530 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 MIA3Q5JRA6 1907 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 CETN3O15182 167 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 EGFP01133 1207 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 EPB41P11171 864 aaKnown RBP14.49□□□□□ -0.09
TCOF1-215ENST00000515516 GTF2H1P32780 548 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 PNOCQ13519 176 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 EDRF1Q3B7T1 1238 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 WDR44Q5JSH3 913 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 C1orf220Q5T0J3 134 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 HECTD3Q5T447 861 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 SPOPLQ6IQ16 392 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 CEP68Q76N32 757 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 CRYBG2Q8N1P7 616 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 SLC2A14Q8TDB8 520 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 CHFRQ96EP1 664 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 GTPBP4Q9BZE4 634 aaKnown RBP14.49□□□□□ -0.09
TCOF1-215ENST00000515516 NACA2Q9H009 215 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 RNF38Q9H0F5 515 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 LINC00597Q9H2U6 94 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 FBXO44Q9H4M3 255 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 TMEM8AQ9HCN3 771 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 KRT82Q9NSB4 513 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 SMPD4Q9NXE4 827 aa14.49□□□□□ -0.09
TCOF1-215ENST00000515516 CHORDC1Q9UHD1 332 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-215ENST00000515516 PTPRZ1P23471 2315 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-215ENST00000515516 K7ESF4 209 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 RNF40O75150 1001 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 OAS1P00973 400 aaKnown RBP14.48□□□□□ -0.09
TCOF1-215ENST00000515516 FAM200BP0CF97 657 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 CCDC130P13994 396 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 HOXA6P31267 233 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 ASPAP45381 313 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 SLC5A3P53794 718 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 MAP3K7CLP57077 242 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 PPP3CAQ08209 521 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 DMWDQ09019 674 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 ORC1Q13415 861 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 LPAL2Q16609 132 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 KRT39Q6A163 491 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 LAIR1Q6GTX8 287 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 PAQR9Q6ZVX9 377 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 SMYD4Q8IYR2 804 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-215ENST00000515516 FUKQ8N0W3 1084 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 FMR1NBQ8N0W7 255 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-215ENST00000515516 SCAMP5Q8TAC9 235 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 TAS1R2Q8TE23 839 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 GSDMAQ96QA5 445 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 NT5C1AQ9BXI3 368 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 NIF3L1Q9GZT8 377 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 FAM49BQ9NUQ9 324 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 TMEM30AQ9NV96 361 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 CFAP97Q9P2B7 532 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 TICRRQ7Z2Z1 1910 aa14.48□□□□□ -0.09
TCOF1-215ENST00000515516 DMDP11532 3685 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 COL4A2P08572 1712 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 CD58P19256 250 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 ADORA2BP29275 332 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 FOXK2Q01167 660 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 ZNF658Q5TYW1 1059 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-215ENST00000515516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-215ENST00000515516 FILIP1Q7Z7B0 1213 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 WDR5BQ86VZ2 330 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 C12orf29Q8N999 325 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 SMARCE1Q969G3 411 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 ACDQ96AP0 544 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 FBRSL1Q9HCM7 1045 aaKnown RBP14.47□□□□□ -0.09
TCOF1-215ENST00000515516 TLR8Q9NR97 1041 aaKnown RBP14.47□□□□□ -0.09
TCOF1-215ENST00000515516 TBC1D14Q9P2M4 693 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 USP18Q9UMW8 372 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 SH3BP1Q9Y3L3 701 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 F5P12259 2224 aa14.47□□□□□ -0.09
TCOF1-215ENST00000515516 NUP210Q8TEM1 1887 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-215ENST00000515516 CACNA1IQ9P0X4 2223 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms