RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	SLC8A2	Q9UPR5	921 aa		13.12	□□□□□ -0.31
CDK18-223	ENST00000515514	HPSE	Q9Y251	543 aa		13.12	□□□□□ -0.31
CDK18-223	ENST00000515514	MED19	A0JLT2	244 aa	Predicted RBP	13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	LEFTY2	O00292	366 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	RTN3	O95197	1032 aa	Predicted RBP	13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	KIF20A	O95235	890 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	C4BPA	P04003	597 aa	Known RBP	13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	P4HA1	P13674	534 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	GALK1	P51570	392 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	CACNA2D1	P54289	1103 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	TAF10	Q12962	218 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	CSRP2	Q16527	193 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	ZACN	Q401N2	412 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	NAIF1	Q69YI7	327 aa	Predicted RBP	13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	SCARA5	Q6ZMJ2	495 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	CAMKK1	Q8N5S9	505 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	TMC2	Q8TDI7	906 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	SMARCD1	Q96GM5	515 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	RTKN	Q9BST9	563 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	B3GNT5	Q9BYG0	378 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	SEMA4G	Q9NTN9	838 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	CPQ	Q9Y646	472 aa		13.11	□□□□□ -0.31
CDK18-223	ENST00000515514	FAM237A	A0A1B0GTK4	181 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514		A0A1B0GVL5	298 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	CLDN5	O00501	218 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	SLC9A3R1	O14745	358 aa	Predicted RBP	13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	MAPK13	O15264	365 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	RPP40	O75818	363 aa	Known RBP	13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	VNN1	O95497	513 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	SYK	P43405	635 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	TUB	P50607	506 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	ZXDB	P98169	803 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	NFIL3	Q16649	462 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	PRR23C	Q6ZRP0	262 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	SYT13	Q7L8C5	426 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	NUP93	Q8N1F7	819 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	FAM160A2	Q8N612	972 aa	Predicted RBP	13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	SPRYD3	Q8NCJ5	442 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	RPLP0P6	Q8NHW5	317 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	NETO1	Q8TDF5	533 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	TAF4B	Q92750	862 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	EZH1	Q92800	747 aa	Predicted RBP	13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	CCDC47	Q96A33	483 aa	Known RBP	13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	LOXL4	Q96JB6	756 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	TRAF3IP3	Q9Y228	551 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	FRMD4B	Q9Y2L6	1034 aa		13.1	□□□□□ -0.31
CDK18-223	ENST00000515514	IKBKB	O14920	756 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	CALU	O43852	315 aa	Predicted RBP	13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	RHOBTB3	O94955	611 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	RPN1	P04843	607 aa	Known RBP	13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	CYP17A1	P05093	508 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	CCDC192	P0DO97	292 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	YWHAQ	P27348	245 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	HOXC13	P31276	330 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	OPRD1	P41143	372 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	EIF2D	P41214	584 aa	Known RBP	13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	PIK3CA	P42336	1068 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	RAP1GAP	P47736	663 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	SLC5A3	P53794	718 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	ENPEP	Q07075	957 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	SGSM1	Q2NKQ1	1148 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	CEP135	Q66GS9	1140 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	CACNA2D4	Q7Z3S7	1137 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	FBXO32	Q969P5	355 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	HHIP	Q96QV1	700 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	DUSP9	Q99956	384 aa	Known RBP	13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	MED10	Q9BTT4	135 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	RNF38	Q9H0F5	515 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	SDCBP2	Q9H190	292 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	KRT82	Q9NSB4	513 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	SMPD4	Q9NXE4	827 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	ATP6V1D	Q9Y5K8	247 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	MYO16	Q9Y6X6	1858 aa		13.09	□□□□□ -0.31
CDK18-223	ENST00000515514	NCOR2	Q9Y618	2525 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514		A0A1W2PQ27	194 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514		A0A1W2PQ64	194 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514		A0A1W2PQD8	194 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	FAM92A	A1XBS5	289 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	TNFRSF10B	O14763	440 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	AXIN1	O15169	862 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	EPN2	O95208	641 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	APBB3	O95704	486 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	ADH1C	P00326	375 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	ABL1	P00519	1130 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	ASS1	P00966	412 aa	Known RBP	13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	MBL2	P11226	248 aa	Predicted RBP	13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	TRIM21	P19474	475 aa	Known RBP	13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	ASPA	P45381	313 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	PXN	P49023	591 aa	Predicted RBP	13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	NDUFA8	P51970	172 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	ATXN1	P54253	815 aa	Known RBP	13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	CDH8	P55286	799 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	DLG4	P78352	724 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	IFRD2	Q12894	506 aa	Predicted RBP	13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	DMC1	Q14565	340 aa		13.08	□□□□□ -0.32
CDK18-223	ENST00000515514	GAB4	Q2WGN9	574 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms