RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 SPRYD3Q8NCJ5 442 aa12.67□□□□□ -0.38
CSF1R-208ENST00000515239 DNASE2BQ8WZ79 361 aa12.67□□□□□ -0.38
CSF1R-208ENST00000515239 KCNN1Q92952 543 aa12.67□□□□□ -0.38
CSF1R-208ENST00000515239 ACBD6Q9BR61 282 aa12.67□□□□□ -0.38
CSF1R-208ENST00000515239 TIPINQ9BVW5 301 aa12.67□□□□□ -0.38
CSF1R-208ENST00000515239 PRDM16Q9HAZ2 1276 aa12.67□□□□□ -0.38
CSF1R-208ENST00000515239 CD93Q9NPY3 652 aa12.67□□□□□ -0.38
CSF1R-208ENST00000515239 DPP3Q9NY33 737 aa12.67□□□□□ -0.38
CSF1R-208ENST00000515239 GTF3C4Q9UKN8 822 aa12.67□□□□□ -0.38
CSF1R-208ENST00000515239 KNL1Q8NG31 2342 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 A0A0B4J269 797 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 TBC1D3BA6NDS4 549 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 SLC9A3R1O14745 358 aaPredicted RBP12.66□□□□□ -0.38
CSF1R-208ENST00000515239 CILPO75339 1184 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 REC8O95072 547 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 HOXB2P14652 356 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 PFKLP17858 780 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 NDUFV2P19404 249 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 WASP42768 502 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 FOSBP53539 338 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 SLC7A9P82251 487 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 BNC1Q01954 994 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 ORC2Q13416 577 aaPredicted RBP12.66□□□□□ -0.38
CSF1R-208ENST00000515239 SMAD1Q15797 465 aaKnown RBP12.66□□□□□ -0.38
CSF1R-208ENST00000515239 WDR45BQ5MNZ6 344 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 PCSK4Q6UW60 755 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 LURAP1LQ8IV03 231 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 RHBDD1Q8TEB9 315 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 SNX29Q8TEQ0 813 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 BICD1Q96G01 975 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 KIF2CQ99661 725 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 CDC6Q99741 560 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 ASB7Q9H672 318 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 GAREM1Q9H706 876 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 TM7SF3Q9NS93 570 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 FNDC3AQ9Y2H6 1198 aaKnown RBP12.66□□□□□ -0.38
CSF1R-208ENST00000515239 C2CD2Q9Y426 696 aa12.66□□□□□ -0.38
CSF1R-208ENST00000515239 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.65□□□□□ -0.38
CSF1R-208ENST00000515239 E9PAM4 449 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 ADH1CP00326 375 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 PIGRP01833 764 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 ADH5P11766 374 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 NTSR1P30989 418 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 EIF2S3P41091 472 aaKnown RBP12.65□□□□□ -0.38
CSF1R-208ENST00000515239 LIG4P49917 911 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 PDE6CP51160 858 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 NCKAP1LP55160 1127 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 USP46P62068 366 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 CFAP221Q4G0U5 840 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 GLIPR1L2Q4G1C9 344 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 INTS6LQ5JSJ4 861 aaKnown RBP12.65□□□□□ -0.38
CSF1R-208ENST00000515239 LY6G5CQ5SRR4 150 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 TRMT11Q7Z4G4 463 aaKnown RBP12.65□□□□□ -0.38
CSF1R-208ENST00000515239 SCN4BQ8IWT1 228 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 ETFBKMTQ8IXQ9 262 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 PDCL2Q8N4E4 241 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 NAT16Q8N8M0 369 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 NECAB1Q8N987 351 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 FOXJ1Q92949 421 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 ACOX2Q99424 681 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 DDX43Q9NXZ2 648 aaKnown RBP12.65□□□□□ -0.38
CSF1R-208ENST00000515239 CABIN1Q9Y6J0 2220 aa12.65□□□□□ -0.38
CSF1R-208ENST00000515239 SPTA1P02549 2419 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 TCHHQ07283 1943 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 A0A1B0GTW7 788 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 GOLGA8CPA6NN73 597 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 PP2D1A8MPX8 630 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 CAPN9O14815 690 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 HNRNPDLO14979 420 aaKnown RBP12.64□□□□□ -0.39
CSF1R-208ENST00000515239 TLX3O43711 291 aaPredicted RBP12.64□□□□□ -0.39
CSF1R-208ENST00000515239 NDUFS2O75306 463 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 OLFM2O95897 454 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 ACAT1P24752 427 aaKnown RBP12.64□□□□□ -0.39
CSF1R-208ENST00000515239 ACOT2P49753 483 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 CFHR1Q03591 330 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 HLA-BQ31612 363 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 SLC39A4Q6P5W5 647 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 IPO4Q8TEX9 1081 aaKnown RBP12.64□□□□□ -0.39
CSF1R-208ENST00000515239 ERLEC1Q96DZ1 483 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 MRGPRX1Q96LB2 322 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 FCRL3Q96P31 734 aaPredicted RBP12.64□□□□□ -0.39
CSF1R-208ENST00000515239 MMTAG2Q9BU76 263 aaKnown RBP12.64□□□□□ -0.39
CSF1R-208ENST00000515239 MSTO1Q9BUK6 570 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 SLC6A17Q9H1V8 727 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 SMPD4Q9NXE4 827 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 TRPM5Q9NZQ8 1165 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 CFAP97Q9P2B7 532 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 L1RE1Q9UN81 338 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 BTBD3Q9Y2F9 522 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 STARD13Q9Y3M8 1113 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 NFE2L3Q9Y4A8 694 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 PCDHGB2Q9Y5G2 931 aa12.64□□□□□ -0.39
CSF1R-208ENST00000515239 MYH11P35749 1972 aa12.63□□□□□ -0.39
CSF1R-208ENST00000515239 ZNF840PA6NDX5 716 aa12.63□□□□□ -0.39
CSF1R-208ENST00000515239 PLK4O00444 970 aa12.63□□□□□ -0.39
CSF1R-208ENST00000515239 TRIM24O15164 1050 aa12.63□□□□□ -0.39
CSF1R-208ENST00000515239 FLRT2O43155 660 aa12.63□□□□□ -0.39
CSF1R-208ENST00000515239 EPB41L2O43491 1005 aaKnown RBP12.63□□□□□ -0.39
CSF1R-208ENST00000515239 JAK2O60674 1132 aa12.63□□□□□ -0.39
CSF1R-208ENST00000515239 TULP3O75386 442 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms