RNA–Protein interactions for RNA: ENST00000515014.5

BRD8-225, Transcript of bromodomain containing 8, human

TSL 5

Gene BRD8, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD8-225	ENST00000515014	DNMT3B	Q9UBC3	853 aa	Known RBP	4.38	□□□□□ -1.71
BRD8-225	ENST00000515014	ARHGAP26	Q9UNA1	814 aa		4.38	□□□□□ -1.71
BRD8-225	ENST00000515014	ATP11B	Q9Y2G3	1177 aa		4.38	□□□□□ -1.71
BRD8-225	ENST00000515014	SLC45A1	Q9Y2W3	748 aa		4.38	□□□□□ -1.71
BRD8-225	ENST00000515014	TNIK	Q9UKE5	1360 aa		4.38	□□□□□ -1.71
BRD8-225	ENST00000515014	PTPRG	P23470	1445 aa		4.38	□□□□□ -1.71
BRD8-225	ENST00000515014	hCG_1984214	I3L0E3	225 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	PCDH17	O14917	1159 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	ZSCAN9	O15535	394 aa	Predicted RBP	4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	DNPH1	O43598	174 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	TMCC2	O75069	709 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	TBX18	O95935	607 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	SCGB1D1	O95968	90 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	SPATA31D3	P0C874	917 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	CD19	P15391	556 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	GLDC	P23378	1020 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	GCSH	P23434	173 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	PSMA4	P25789	261 aa	Known RBP	4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	EPHA3	P29320	983 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	SERPINA4	P29622	427 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	GCLC	P48506	637 aa	Predicted RBP	4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	DGKE	P52429	567 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	RNASE9	P60153	205 aa	Known RBP	4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	ARF3	P61204	181 aa	Predicted RBP	4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	ADAM17	P78536	824 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	ARF1	P84077	181 aa	Known RBP	4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	CUL4B	Q13620	913 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	CCNI	Q14094	377 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	SMAD1	Q15797	465 aa	Known RBP	4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	TTC22	Q5TAA0	569 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	ATG16L1	Q676U5	607 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	DGAT2L7P	Q6IED9	249 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	TAPT1	Q6NXT6	567 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	FOXR2	Q6PJQ5	311 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	ZDHHC24	Q6UX98	284 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	SPATA31D4	Q6ZUB0	917 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	LRRC8D	Q7L1W4	858 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	GPRIN1	Q7Z2K8	1008 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	KRT77	Q7Z794	578 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	ARMC8	Q8IUR7	673 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	CPO	Q8IVL8	374 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	TMEM151B	Q8IW70	566 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	KBTBD2	Q8IY47	623 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	CARF	Q8N187	725 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	CFAP52	Q8N1V2	620 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	PSD4	Q8NDX1	1056 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	BPIFB1	Q8TDL5	484 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	ST8SIA2	Q92186	375 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	HVCN1	Q96D96	273 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	PWWP2A	Q96N64	755 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	TWNK	Q96RR1	684 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	TRIB1	Q96RU8	372 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	TTYH3	Q9C0H2	523 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	C12orf65	Q9H3J6	166 aa	Known RBP	4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	RNPEP	Q9H4A4	650 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	SPON1	Q9HCB6	807 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	LIN7C	Q9NUP9	197 aa	Known RBP	4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	FBXO34	Q9NWN3	711 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	GGA3	Q9NZ52	723 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	SCAF8	Q9UPN6	1271 aa	Known RBP	4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	SPATA31A3	Q5VYP0	1347 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	EEA1	Q15075	1411 aa		4.37	□□□□□ -1.71
BRD8-225	ENST00000515014	UGGT2	Q9NYU1	1516 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	IQGAP2	Q13576	1575 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	FSD2	A1L4K1	749 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	ZNF503-AS2	A6NEH8	195 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	MROH6	A6NGR9	719 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014		B9A039	149 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014		E7EVH7	732 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	CD3EAP	O15446	510 aa	Known RBP	4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	SRGAP2	O75044	1071 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	RTN3	O95197	1032 aa	Predicted RBP	4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	PLA2G1B	P04054	148 aa	Known RBP	4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	ITGB1	P05556	798 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	RXRA	P19793	462 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	RBL1	P28749	1068 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	AKT1	P31749	480 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	GPD2	P43304	727 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	PNLIPRP1	P54315	467 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	DCAF7	P61962	342 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	TBL3	Q12788	808 aa	Known RBP	4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	NFIX	Q14938	502 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	TOMM20	Q15388	145 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	GPR68	Q15743	365 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	CCNG2	Q16589	344 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	BAK1	Q16611	211 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	ZNF385B	Q569K4	471 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	ZNF569	Q5MCW4	686 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	MANEAL	Q5VSG8	457 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	CCDC30	Q5VVM6	783 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	MCTP2	Q6DN12	878 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	ABLIM2	Q6H8Q1	611 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	ACAD10	Q6JQN1	1059 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	HEATR4	Q86WZ0	1026 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	RAB11FIP4	Q86YS3	637 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	SLC15A3	Q8IY34	581 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	SCAMP5	Q8TAC9	235 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	ADAMTS17	Q8TE56	1095 aa		4.36	□□□□□ -1.71
BRD8-225	ENST00000515014	ST8SIA4	Q92187	359 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms