RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 GPR158Q5T848 1215 aa15.07■□□□□ 0
NUP54-216ENST00000514901 TMEM150AQ86TG1 271 aa15.07■□□□□ 0
NUP54-216ENST00000514901 MON1AQ86VX9 555 aa15.07■□□□□ 0
NUP54-216ENST00000514901 FAM71AQ8IYT1 594 aa15.07■□□□□ 0
NUP54-216ENST00000514901 SMARCD2Q92925 531 aa15.07■□□□□ 0
NUP54-216ENST00000514901 FBXO32Q969P5 355 aa15.07■□□□□ 0
NUP54-216ENST00000514901 ASB16Q96NS5 453 aa15.07■□□□□ 0
NUP54-216ENST00000514901 ANP32EQ9BTT0 268 aa15.07■□□□□ 0
NUP54-216ENST00000514901 GANQ9H2C0 597 aa15.07■□□□□ 0
NUP54-216ENST00000514901 KCNK12Q9HB15 430 aa15.07■□□□□ 0
NUP54-216ENST00000514901 TRPV4Q9HBA0 871 aa15.07■□□□□ 0
NUP54-216ENST00000514901 FAM207AQ9NSI2 230 aaPredicted RBP15.07■□□□□ 0
NUP54-216ENST00000514901 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.07■□□□□ 0
NUP54-216ENST00000514901 FHOD1Q9Y613 1164 aa15.07■□□□□ 0
NUP54-216ENST00000514901 A0A1W2PQC6 194 aa15.06■□□□□ 0
NUP54-216ENST00000514901 HHLA1C9JL84 531 aa15.06■□□□□ 0
NUP54-216ENST00000514901 XPO1O14980 1071 aaKnown RBP15.06■□□□□ 0
NUP54-216ENST00000514901 CYP26A1O43174 497 aa15.06■□□□□ 0
NUP54-216ENST00000514901 ECI2O75521 394 aa15.06■□□□□ 0
NUP54-216ENST00000514901 ALADP13716 330 aa15.06■□□□□ 0
NUP54-216ENST00000514901 BRD2P25440 801 aaKnown RBP15.06■□□□□ 0
NUP54-216ENST00000514901 KIF11P52732 1056 aa15.06■□□□□ 0
NUP54-216ENST00000514901 POLR2FP61218 127 aaKnown RBP15.06■□□□□ 0
NUP54-216ENST00000514901 FANCCQ00597 558 aa15.06■□□□□ 0
NUP54-216ENST00000514901 TDGQ13569 410 aa15.06■□□□□ 0
NUP54-216ENST00000514901 HTR4Q13639 388 aa15.06■□□□□ 0
NUP54-216ENST00000514901 NR1I3Q14994 352 aa15.06■□□□□ 0
NUP54-216ENST00000514901 PKDCCQ504Y2 493 aa15.06■□□□□ 0
NUP54-216ENST00000514901 FAM78AQ5JUQ0 283 aa15.06■□□□□ 0
NUP54-216ENST00000514901 TTC30AQ86WT1 665 aa15.06■□□□□ 0
NUP54-216ENST00000514901 STKLD1Q8NE28 680 aa15.06■□□□□ 0
NUP54-216ENST00000514901 SCAMP5Q8TAC9 235 aa15.06■□□□□ 0
NUP54-216ENST00000514901 ZSCAN18Q8TBC5 510 aaPredicted RBP15.06■□□□□ 0
NUP54-216ENST00000514901 ZNF606Q8WXB4 792 aa15.06■□□□□ 0
NUP54-216ENST00000514901 ZSWIM3Q96MP5 696 aa15.06■□□□□ 0
NUP54-216ENST00000514901 ZFP14Q9HCL3 533 aa15.06■□□□□ 0
NUP54-216ENST00000514901 SCML2Q9UQR0 700 aa15.06■□□□□ 0
NUP54-216ENST00000514901 ZNF638Q14966 1978 aaKnown RBP15.05■□□□□ 0
NUP54-216ENST00000514901 ZNF840PA6NDX5 716 aa15.05■□□□□ -0
NUP54-216ENST00000514901 NRG2O14511 850 aaPredicted RBP15.05■□□□□ -0
NUP54-216ENST00000514901 TEX33O43247 280 aa15.05■□□□□ -0
NUP54-216ENST00000514901 THAP12O43422 761 aa15.05■□□□□ -0
NUP54-216ENST00000514901 TPM3P06753 285 aa15.05■□□□□ -0
NUP54-216ENST00000514901 PLA2G4AP47712 749 aa15.05■□□□□ -0
NUP54-216ENST00000514901 KLK7P49862 253 aa15.05■□□□□ -0
NUP54-216ENST00000514901 UBASH3AP57075 661 aa15.05■□□□□ -0
NUP54-216ENST00000514901 CYP4F8P98187 520 aa15.05■□□□□ -0
NUP54-216ENST00000514901 PDE4CQ08493 712 aa15.05■□□□□ -0
NUP54-216ENST00000514901 PTPN21Q16825 1174 aa15.05■□□□□ -0
NUP54-216ENST00000514901 SNX30Q5VWJ9 437 aa15.05■□□□□ -0
NUP54-216ENST00000514901 PARM1Q6UWI2 310 aa15.05■□□□□ -0
NUP54-216ENST00000514901 PIGZQ86VD9 579 aa15.05■□□□□ -0
NUP54-216ENST00000514901 FMNL3Q8IVF7 1028 aa15.05■□□□□ -0
NUP54-216ENST00000514901 UBALD2Q8IYN6 164 aa15.05■□□□□ -0
NUP54-216ENST00000514901 CMTM8Q8IZV2 173 aa15.05■□□□□ -0
NUP54-216ENST00000514901 UBA3Q8TBC4 463 aa15.05■□□□□ -0
NUP54-216ENST00000514901 KCTD13Q8WZ19 329 aa15.05■□□□□ -0
NUP54-216ENST00000514901 ELSPBP1Q96BH3 223 aa15.05■□□□□ -0
NUP54-216ENST00000514901 HSFY1Q96LI6 401 aa15.05■□□□□ -0
NUP54-216ENST00000514901 NAP1L5Q96NT1 182 aaPredicted RBP15.05■□□□□ -0
NUP54-216ENST00000514901 SPAG5Q96R06 1193 aa15.05■□□□□ -0
NUP54-216ENST00000514901 ZSWIM1Q9BR11 485 aa15.05■□□□□ -0
NUP54-216ENST00000514901 SLC46A2Q9BY10 475 aa15.05■□□□□ -0
NUP54-216ENST00000514901 LRRC4Q9HBW1 653 aa15.05■□□□□ -0
NUP54-216ENST00000514901 OBP2AQ9NY56 170 aa15.05■□□□□ -0
NUP54-216ENST00000514901 AJAP1Q9UKB5 411 aaPredicted RBP15.05■□□□□ -0
NUP54-216ENST00000514901 SORCS3Q9UPU3 1222 aa15.05■□□□□ -0
NUP54-216ENST00000514901 USP3Q9Y6I4 520 aa15.05■□□□□ -0
NUP54-216ENST00000514901 NUMBLQ9Y6R0 609 aa15.05■□□□□ -0
NUP54-216ENST00000514901 DENND4CQ5VZ89 1909 aa15.04■□□□□ -0
NUP54-216ENST00000514901 TRAV19A0A0A6YYK7 116 aa15.04■□□□□ -0
NUP54-216ENST00000514901 F8VZ95 297 aa15.04■□□□□ -0
NUP54-216ENST00000514901 M0QYV0 167 aa15.04■□□□□ -0
NUP54-216ENST00000514901 DCXO43602 365 aa15.04■□□□□ -0
NUP54-216ENST00000514901 TADA3O75528 432 aa15.04■□□□□ -0
NUP54-216ENST00000514901 ASGR2P07307 311 aa15.04■□□□□ -0
NUP54-216ENST00000514901 CLCN1P35523 988 aa15.04■□□□□ -0
NUP54-216ENST00000514901 AVPR1AP37288 418 aa15.04■□□□□ -0
NUP54-216ENST00000514901 PSEN1P49768 467 aa15.04■□□□□ -0
NUP54-216ENST00000514901 TUBP50607 506 aa15.04■□□□□ -0
NUP54-216ENST00000514901 IFRD2Q12894 506 aaPredicted RBP15.04■□□□□ -0
NUP54-216ENST00000514901 RAB41Q5JT25 222 aa15.04■□□□□ -0
NUP54-216ENST00000514901 TXNDC8Q6A555 127 aa15.04■□□□□ -0
NUP54-216ENST00000514901 POTEHQ6S545 545 aa15.04■□□□□ -0
NUP54-216ENST00000514901 ARID3BQ8IVW6 561 aaPredicted RBP15.04■□□□□ -0
NUP54-216ENST00000514901 SLC44A3Q8N4M1 653 aa15.04■□□□□ -0
NUP54-216ENST00000514901 MAB21L3Q8N8X9 362 aa15.04■□□□□ -0
NUP54-216ENST00000514901 STK32AQ8WU08 396 aa15.04■□□□□ -0
NUP54-216ENST00000514901 SLC35F5Q8WV83 523 aa15.04■□□□□ -0
NUP54-216ENST00000514901 FGF14Q92915 247 aa15.04■□□□□ -0
NUP54-216ENST00000514901 TLR8Q9NR97 1041 aaKnown RBP15.04■□□□□ -0
NUP54-216ENST00000514901 CHORDC1Q9UHD1 332 aaPredicted RBP15.04■□□□□ -0
NUP54-216ENST00000514901 PCDHGC3Q9UN70 934 aa15.04■□□□□ -0
NUP54-216ENST00000514901 DPYSL4O14531 572 aa15.03■□□□□ -0
NUP54-216ENST00000514901 ABL1P00519 1130 aa15.03■□□□□ -0
NUP54-216ENST00000514901 USP17L7P0C7H9 530 aa15.03■□□□□ -0
NUP54-216ENST00000514901 ZDHHC11BP0C7U3 371 aa15.03■□□□□ -0
NUP54-216ENST00000514901 HDCP19113 662 aa15.03■□□□□ -0
NUP54-216ENST00000514901 KRT9P35527 623 aa15.03■□□□□ -0
NUP54-216ENST00000514901 SOX5P35711 763 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms