RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 DNAJB11Q9UBS4 358 aa5.91□□□□□ -1.46
RFC1-216ENST00000514572 C19orf53Q9UNZ5 99 aaPredicted RBP5.91□□□□□ -1.46
RFC1-216ENST00000514572 SLC30A1Q9Y6M5 507 aa5.91□□□□□ -1.46
RFC1-216ENST00000514572 PEG3Q9GZU2 1588 aa5.91□□□□□ -1.46
RFC1-216ENST00000514572 TCAF2A6NFQ2 919 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 SRGAP2O75044 1071 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 RASAL1O95294 804 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 TSPAN15O95858 294 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 CNPP09543 421 aaKnown RBP5.9□□□□□ -1.46
RFC1-216ENST00000514572 ATP1A3P13637 1013 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 HTR7P34969 479 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 PPP2CBP62714 309 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 PPP2CAP67775 309 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 TIAL1Q01085 375 aaKnown RBP eCLIP5.9□□□□□ -1.46
RFC1-216ENST00000514572 KRT17Q04695 432 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 TRPC3Q13507 836 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 ELAVL1Q15717 326 aaKnown RBP5.9□□□□□ -1.46
RFC1-216ENST00000514572 SMAD1Q15797 465 aaKnown RBP5.9□□□□□ -1.46
RFC1-216ENST00000514572 ANKRD45Q5TZF3 282 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 TSPYL6Q8N831 410 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 AFG1LQ8WV93 481 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 HDAC2Q92769 488 aaKnown RBP5.9□□□□□ -1.46
RFC1-216ENST00000514572 ZBTB10Q96DT7 871 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 TMEM176AQ96HP8 235 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 FAM84AQ96KN4 292 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 TRAPPC9Q96Q05 1148 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 LRRC37BQ96QE4 947 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 PTDSS2Q9BVG9 487 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 TAF1DQ9H5J8 278 aaPredicted RBP5.9□□□□□ -1.46
RFC1-216ENST00000514572 JMJD4Q9H9V9 463 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 POGKQ9P215 609 aa5.9□□□□□ -1.46
RFC1-216ENST00000514572 MRPS17Q9Y2R5 130 aaKnown RBP5.9□□□□□ -1.46
RFC1-216ENST00000514572 LAS1LQ9Y4W2 734 aaKnown RBP5.9□□□□□ -1.46
RFC1-216ENST00000514572 COL15A1P39059 1388 aa5.9□□□□□ -1.47
RFC1-216ENST00000514572 BTBD11A6QL63 1104 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 F5H0A9 414 aaPredicted RBP5.89□□□□□ -1.47
RFC1-216ENST00000514572 J3KTA2 159 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 AGPSO00116 658 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 LEFTY2O00292 366 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 CCNT2O60583 730 aaKnown RBP5.89□□□□□ -1.47
RFC1-216ENST00000514572 TAF5LO75529 589 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 DDX58O95786 925 aaKnown RBP5.89□□□□□ -1.47
RFC1-216ENST00000514572 TBX18O95935 607 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 IFIT1P09914 478 aaKnown RBP5.89□□□□□ -1.47
RFC1-216ENST00000514572 C1QTNF9P0C862 333 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 SPATA31D3P0C874 917 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 KCNA2P16389 499 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 XBP1P17861 261 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 ZEB1P37275 1124 aaPredicted RBP5.89□□□□□ -1.47
RFC1-216ENST00000514572 IRX6P78412 446 aaPredicted RBP5.89□□□□□ -1.47
RFC1-216ENST00000514572 KCTD2Q14681 263 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 BTBD16Q32M84 506 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 ATPAF1Q5TC12 328 aaPredicted RBP5.89□□□□□ -1.47
RFC1-216ENST00000514572 CFAP161Q6P656 301 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 TMEM108Q6UXF1 575 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 SPATA31D4Q6ZUB0 917 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 LGI4Q8N135 537 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 BHLHE22Q8NFJ8 381 aaPredicted RBP5.89□□□□□ -1.47
RFC1-216ENST00000514572 DNAJB14Q8TBM8 379 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 COG8Q96MW5 612 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 NDRG4Q9ULP0 352 aaKnown RBP5.89□□□□□ -1.47
RFC1-216ENST00000514572 CNTN6Q9UQ52 1028 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 CHST2Q9Y4C5 530 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 SPATA31A3Q5VYP0 1347 aa5.89□□□□□ -1.47
RFC1-216ENST00000514572 A0A1W2PS29 197 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 GXYLT2A0PJZ3 443 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 FAM90A20PA6NIJ5 464 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 TIMM44O43615 452 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 MFAP3LO75121 409 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 RAD17O75943 681 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 ZFPL1O95159 310 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 SRGAP2BP0DMP2 458 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 HGFP14210 728 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 KRT9P35527 623 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 AARSP49588 968 aaKnown RBP eCLIP5.88□□□□□ -1.47
RFC1-216ENST00000514572 ANXA11P50995 505 aaKnown RBP5.88□□□□□ -1.47
RFC1-216ENST00000514572 OCA2Q04671 838 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 FOXL1Q12952 345 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 NRN1LQ496H8 165 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 CERCAMQ5T4B2 595 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 SLFN13Q68D06 897 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 RINT1Q6NUQ1 792 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 SLC30A10Q6XR72 485 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 DSTYKQ6XUX3 929 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 LRRC55Q6ZSA7 311 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 ARHGEF18Q6ZSZ5 1173 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 TAX1BP1Q86VP1 789 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 OR56A1Q8NGH5 318 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 CSGALNACT1Q8TDX6 532 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 ADAMTS18Q8TE60 1221 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 PPP2R3CQ969Q6 453 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 GRAMD1AQ96CP6 724 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 ABHD16BQ9H3Z7 469 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 TBC1D22BQ9NU19 505 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 SSX2IPQ9Y2D8 614 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 SLC45A1Q9Y2W3 748 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 NEU2Q9Y3R4 380 aa5.88□□□□□ -1.47
RFC1-216ENST00000514572 A0A1B0GTW7 788 aa5.87□□□□□ -1.47
RFC1-216ENST00000514572 RPP40O75818 363 aaKnown RBP5.87□□□□□ -1.47
RFC1-216ENST00000514572 TFRCP02786 760 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms